Concurrent Post
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Faculty of Science and Engineering Graduate School of Advanced Science and Engineering
Details of a Researcher
Updated on 2022/05/17
Faculty of Science and Engineering Graduate School of Advanced Science and Engineering
理工学術院総合研究所 兼任研究員
University of Tokyo Graduate School of Arts and Sciences Biophysics
University of Tokyo Graduate School of Arts and Sciences Biophysics
University of Tokyo Faculty of Liberal Arts Department of Pure and Applied Sciences
University of Tokyo Doctor of Philosophy
Graduate School of Science and Engineerging, Waseda University Dept of Pure and Applied Physics Professor
School of Science and Engineerring, Waseda University Dept of Physics Associate Professor
School of Science and Engineerring, Waseda University Dept of Physics Assistant Professor
Graduate School of Arts and Sciences, University of Tokyo, Institute of Physics Assistant Professor
Protein Society
Biophysical Society
Physical Society of Japan
Biophysical Society of Japan
Biophysics, chemical physics and soft matter physics
Biophysics
protein, biomolecular system, molecular motor, molecular machine, molecular dynamics, numerical analysis, computer simulation, intermolecular interaction, non-linear statistical physics, physical property of water, structure-function relationship, molecular recognition, network, Brownian ratchet mechanism, energy conversion mechanism, allostery
Ohnuki et al. Reply
J Ohnuki, T Sato, T Sasaki, K Umezawa, M Takano
Physical Review Letters 123 049602 2019.07
Coupling of redox and structural states in cytochrome P450 reductase studied by molecular dynamics simulation
M. Iijima, J Ohnuki, T. Sato, M. Sugishima, M Takano
9 9341 2019.06 [Refereed]
Hydrophobic surface enhances electrostatic interaction in water
T Sato, T Sasaki, J Ohnuki, K Umezawa, M Takano
Physical Review Letters 121 2018.11
Orchestrated electrostatic interactions among myosin, actin, ATP, and water
M Takano
The Role of Water in ATP Hydrolysis Energy Transduction by Protein Machinery 113 - 122 2018.05
Long-range coupling between ATP-binding and lever-arm regions in myosin via dielectric allostery
Takato Sato, Jun Ohnuki, Mitsunori Takano
JOURNAL OF CHEMICAL PHYSICS 147 ( 21 ) 2017.12 [Refereed]
Electrostatic balance between global repulsion and local attraction in reentrant polymerization of actin
Jun Ohnuki, Akira Yodogawa, Mitsunori Takano
CYTOSKELETON 74 ( 12 ) 504 - 511 2017.12 [Refereed]
Over-Destabilization of Protein-Protein Interaction in Generalized Born Model and Utility of Energy Density Integration Cutoff
Yukinobu Mizuhara, Dan Parkin, Koji Umezawa, Jun Ohnuki, Mitsunori Takano
JOURNAL OF PHYSICAL CHEMISTRY B 121 ( 18 ) 4669 - 4677 2017.05 [Refereed]
Dielectric Allostery of Protein: Response of Myosin to ATP Binding
Takato Sato, Jun Ohnuki, Mitsunori Takano
JOURNAL OF PHYSICAL CHEMISTRY B 120 ( 51 ) 13047 - 13055 2016.12 [Refereed]
Intrinsic disorder accelerates dissociation rather than association
Koji Umezawa, Jun Ohnuki, Junichi Higo, Mitsunori Takano
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS 84 ( 8 ) 1124 - 1133 2016.08 [Refereed]
Piezoelectric allostery of protein
J Ohnuki, T Sato, M Takano
Physical Review E 94 ( 1 ) 2016.07
Coupling of Lever Arm Swing and Biased Brownian Motion in Actomyosin
Qing-Miao Nie, Akio Togashi, Takeshi N. Sasaki, Mitsunori Takano, Masaki Sasai, Tomoki P. Terada
PLOS COMPUTATIONAL BIOLOGY 10 ( 4 ) 2014.04 [Refereed]
Temperature-Enhanced Association of Proteins Due to Electrostatic Interaction: A Coarse-Grained Simulation of Actin-Myosin Binding
Kei-ichi Okazaki, Takato Sato, Mitsunori Takano
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY 134 ( 21 ) 8918 - 8925 2012.05 [Refereed]
Conformational ensembles of an intrinsically disordered protein pKID with and without a KIX domain in explicit solvent investigated by all-atom multicanonical molecular dynamics
Koji Umezawa, Jinzen Ikebe, Mitsunori Takano, Haruki Nakamura, Junichi Higo
Biomolecules 2 ( 1 ) 104 - 121 2012
Unidirectional Brownian motion observed in an in silico single molecule experiment of an actomyosin motor
Mitsunori Takano, Tomoki P. Terada, Masaki Sasai
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 107 ( 17 ) 7769 - 7774 2010.04 [Refereed]
Residue network in protein native structure belongs to the universality class of a three-dimensional critical percolation cluster
H Morita, M Takano
Physical Review E 79 020901(R) 2009 [Refereed]
Delta G-based prediction and experimental confirmation of SYCRP1-binding sites on the Synechocystis genome
Katsumi Omagari, Hidehisa Yoshimura, Takayuki Suzuki, Mitunori Takano, Masayuki Ohmori, Akinori Sarai
FEBS JOURNAL 275 ( 19 ) 4786 - 4795 2008.10 [Refereed]
Modeling of a propagation mechanism of infectious prion protein; a hexamer as the minimum infectious unit
Hironorl K. Nakamura, Mitsunori Takano, Kazuo Kuwata
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS 361 ( 3 ) 789 - 793 2007.09 [Refereed]
Violation of the fluctuation-dissipation theorem in a protein system
Kumiko Hayashi, Mitsunori Takano
BIOPHYSICAL JOURNAL 93 ( 3 ) 895 - 901 2007.08 [Refereed]
Temperature of a Hamiltonian system given as the effective temperature of a nonequilibrium steady-state Langevin thermostat
K Hayashi, M Takano
76 ( 5 ) 050104(R) 2007 [Refereed]
Temperature dependence and counter effect of the correlations of folding rate with chain length and with native topology
N. K. Nakamura, M. Takano
Physical Review E 71 061913 2005 [Refereed]
On the model granularity to simulate protein dynamics: A biological physics view on biomolecular computing
Mitsunori Takano, Junichi Higo, Hironori K. Nakamura, Masaki Sasai
Natural Computing 3 ( 4 ) 377 - 393 2004.12
Systematic single base-pair substitution analysis of DNA binding by the cAMP receptor protein in cyanobacterium Synechocystis sp PCC 6803
K Omagari, H Yoshimura, M Takano, DY Hao, M Ohmori, A Sarai, A Suyama
FEBS LETTERS 563 ( 1-3 ) 55 - 58 2004.04 [Refereed]
A PNA-mediated whiplash PCR-based program for in vitro protein evolution
J. A. Rose, M. Takano, A. Suyama
Lecture Note in Computer Sciences 2568 47 - 60 2004 [Refereed]
Squeezed exponential kinetics to describe a non-glassy downhill folding as observed in a lattice protein model
H. K. Nakamura, M. Sasai, M. Takano
Proteins 55 99 - 106 2004
Scrutinizing the squeezed exponential kinetics observed in the folding simulation of an off-lattice Go-like protein model
H. K. Nakamura, M. Sasai, M. Takano
Chemical Physics 307 259 - 267 2004
A DNA computing-based genetic program for in vitro protein evolution via constrained pseudomodule shuffling
John A. Rose, Mitsunori Takano, Masami Hagiya, Akira Suyama
Genetic Programming and Evolvable Machines 4 ( 2 ) 139 - 152 2003.06
Investigating a link between all-atom model simulation and the Ising-based theory on the helix-coil transition. II. Nonstationary properties
M Takano, HK Nakamura, K Nagayama, A Suyama
JOURNAL OF CHEMICAL PHYSICS 118 ( 22 ) 10312 - 10322 2003.06 [Refereed]
Investigating a link between all-atom model simulation and the Ising-based theory on the helix-coil transition: Equilibrium statistical mechanics
M Takano, K Nagayama, A Suyama
JOURNAL OF CHEMICAL PHYSICS 116 ( 5 ) 2219 - 2228 2002.02 [Refereed]
How the all-atom simulation and the Ising-based theory reconcile with each other on the helix-coil transition
M. Takano, K. Nagayama, A. Suyama
Journal of Biological Physics 28 151 - 161 2002 [Refereed]
Molecular dynamics of a 15-residue poly(L-alanine) in water: Helix formation and energetics
M Takano, T Yamato, J Higo, A Suyama, K Nagayama
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY 121 ( 4 ) 605 - 612 1999.02 [Refereed]
Helix-coil transition and 1/f fluctuation in a polypeptide
M Takano, T Takahashi, K Nagayama
PHYSICAL REVIEW LETTERS 80 ( 25 ) 5691 - 5694 1998.06 [Refereed]
The Role of Water in ATP Hydrolysis Energy Transduction by Protein Machinery
Makoto Suzuki edit( Part: Contributor)
Springer Nature Singapore 2018 ISBN: 9789811084584
分子マシンの科学 : 分子の動きとその機能を見る
日本化学会編( Part: Contributor)
化学同人 2017 ISBN: 9784759813869
コンプレックス・ダイナミクスの挑戦
早稲田大学複雑系高等学術研究所編( Part: Contributor)
共立出版 2011 ISBN: 9784320034501
Clarification of Ubiquitous Proton Function in Photoreceptive Proteins by Quantum Molecular Dynamics Simulations
Project Year :
Piezoelectric effect in proteins: a novel mechanism of allostery
Project Year :
Actin structural polymorphism machinery that orchestrates amoeba motility
Project Year :
アクチンの構造多型性・協同性・応答特性の分子機構
Project Year :
Analysis on the structural polymorphism of IDPs by computer simulation
Project Year :
ATPが制御するアクトミオシン強結合-弱結合転移の分子基盤
Project Year :
蛋白質の遅い揺らぎを捉えるための粗視化モデル
Study on hairpin DNA molecular device for autonomous molecular computer
Flexible dynamics of proteins and their functions
アクトミオシンの分子間相互採用モデリングにおける水の役割
回転分子モーターの動力学計算と自由エネルギー変換メカニズムの解明
ATPによるミオシンとアクチンのアロステリック制御の分子機構
超分子モーターFoF1の1分子計算機実験
2020
Science and Engineering Laboratory 1B III
School of Fundamental Science and Engineering
2022 fall semester
Science and Engineering Laboratory 1B III
School of Creative Science and Engineering
2022 fall semester
Basic Experiments in Science and Engineering 2B Seii
School of Advanced Science and Engineering
2022 fall semester
Basic Experiments in Science and Engineering 2B Kagaku
School of Advanced Science and Engineering
2022 fall semester
Science and Engineering Laboratory 1B III
School of Advanced Science and Engineering
2022 fall semester
Graduation Thesis B (Physics) [S Grade]
School of Advanced Science and Engineering
2022 spring semester
Graduation Thesis A (Physics) [S Grade]
School of Advanced Science and Engineering
2022 fall semester
Graduation Thesis A (Applied Physics) [S Grade]
School of Advanced Science and Engineering
2022 fall semester
Graduation Thesis B (Applied Physics) [S Grade]
School of Advanced Science and Engineering
2022 spring semester
Graduation Thesis B (Applied Physics)
School of Advanced Science and Engineering
2022 spring semester
Research on Theoretical Biophysics
Graduate School of Advanced Science and Engineering
2022 full year
Master's Thesis (Department of Integrative Bioscience and Biomedical Engineering)
Graduate School of Advanced Science and Engineering
2022 full year
Master's Thesis (Department of Pure and Applied Physics)
Graduate School of Advanced Science and Engineering
2022 full year
Cluster-Seminar on Computational Sciences
Graduate School of Advanced Science and Engineering
2022 spring semester
Seminar on Theoretical Biophysics B
Graduate School of Advanced Science and Engineering
2022 fall semester
Seminar on Theoretical Biophysics A
Graduate School of Advanced Science and Engineering
2022 spring semester
Seminar on Theoretical Biophysics B
Graduate School of Advanced Science and Engineering
2022 fall semester
Seminar on Theoretical Biophysics A
Graduate School of Advanced Science and Engineering
2022 spring semester
Seminar on Theoretical Biophysics B
Graduate School of Advanced Science and Engineering
2022 fall semester
Seminar on Theoretical Biophysics A
Graduate School of Advanced Science and Engineering
2022 spring semester
Research on Theoretical Biophysics
Graduate School of Advanced Science and Engineering
2022 full year
Master's Thesis (Department of Pure and Applied Physics)
Graduate School of Advanced Science and Engineering
2022 full year
Research on Theoretical Biophysics
Graduate School of Advanced Science and Engineering
2022 full year
Study Abroad in Physics and Applied Physics A
Graduate School of Advanced Science and Engineering
2022 full year
Research on Theoretical Biophysics
Graduate School of Advanced Science and Engineering
2022 full year
Study Abroad in Physics and Applied Physics D
Graduate School of Advanced Science and Engineering
2022 full year
Study Abroad in Physics and Applied Physics C
Graduate School of Advanced Science and Engineering
2022 full year
Study Abroad in Physics and Applied Physics B
Graduate School of Advanced Science and Engineering
2022 full year
Research on Physics and Applied Physics A TAKANO, Mitsunori
Graduate School of Advanced Science and Engineering
2022 full year
Research on Theoretical Biophysics
Graduate School of Advanced Science and Engineering
2022 full year