Updated on 2024/12/26

写真a

 
KHATIWALA, Samar Prakash
 
Affiliation
Faculty of International Research and Education, School of International Liberal Studies
Job title
Professor
 

Papers

  • Using Shortened Spin‐Ups to Speed Up Ocean Biogeochemical Model Optimization

    S. Oliver, S. Khatiwala, C. Cartis, Ben Ward, Iris Kriest

    Journal of Advances in Modeling Earth Systems   16 ( 9 )  2024.09

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    Abstract

    The performance of global ocean biogeochemical models can be quantified as the misfit between modeled tracer distributions and observations, which is sought to be minimized during parameter optimization. These models are computationally expensive due to the long spin‐up time required to reach equilibrium, and therefore optimization is often laborious. To reduce the required computational time, we investigate whether optimization of a biogeochemical model with shorter spin‐ups provides the same optimized parameters as one with a full‐length, equilibrated spin‐up over several millennia. We use the global ocean biogeochemical model MOPS with a range of lengths of model spin‐up and calibrate the model against synthetic observations derived from previous model runs using a derivative‐free optimization algorithm (DFO‐LS). When initiating the biogeochemical model with tracer distributions that differ from the synthetic observations used for calibration, a minimum spin‐up length of 2,000 years was required for successful optimization due to certain parameters which influence the transport of matter from the surface to the deeper ocean, where timescales are longer. However, preliminary results indicate that successful optimization may occur with an even shorter spin‐up by a judicious choice of initial condition, here the synthetic observations used for calibration, suggesting a fruitful avenue for future research.

    DOI

  • Changes in Oceanic Radiocarbon and CFCs Since the 1990s

    J. G. Lester, H. D. Graven, S. Khatiwala, A. P. McNichol

    Journal of Geophysical Research: Oceans   129 ( 7 )  2024.07

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    Abstract

    Anthropogenic perturbations from fossil fuel burning, nuclear bomb testing, and chlorofluorocarbon (CFC) use have created useful transient tracers of ocean circulation. The atmospheric 14C/C ratio (∆14C) peaked in the early 1960s and has decreased now to pre‐industrial levels, while atmospheric CFC‐11 and CFC‐12 concentrations peaked in the early 1990s and early 2000s, respectively, and have now decreased by 10%–20%. We present the first analysis of a decade of new observations (2007 to 2018–2019) and give a comprehensive overview of the changes in ocean ∆14C and CFC concentration since the WOCE surveys in the 1990s. Surface ocean ∆14C decreased at a nearly constant rate from the 1990–2010s (20‰/decade). In most of the surface ocean ∆14C is higher than in atmospheric CO2 while in the interior ocean, only a few places are found to have increases in ∆14C, indicating that globally, oceanic bomb 14C uptake has stopped and reversed. Decreases in surface ocean CFC‐11 started between the 1990 and 2000s, and CFC‐12 between the 2000–2010s. Strong coherence in model biases of decadal changes in all tracers in the Southern Ocean suggest ventilation of Antarctic Intermediate Water was enhanced from the 1990 to the 2000s, whereas ventilation of Subantarctic Mode Water was enhanced from the 2000 to the 2010s. The decrease in surface tracers globally between the 2000 and 2010s is consistently stronger in observations than in models, indicating a reduction in vertical transport and mixing due to stratification.

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  • Bomb radiocarbon evidence for strong global carbon uptake and turnover in terrestrial vegetation

    Heather D. Graven, Hamish Warren, Holly K. Gibbs, Samar Khatiwala, Charles Koven, Joanna Lester, Ingeborg Levin, Seth A. Spawn-Lee, Will Wieder

    Science   384 ( 6702 ) 1335 - 1339  2024.06

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    Vegetation and soils are taking up approximately 30% of anthropogenic carbon dioxide emissions because of small imbalances in large gross carbon exchanges from productivity and turnover that are poorly constrained. We combined a new budget of radiocarbon produced by nuclear bomb testing in the 1960s with model simulations to evaluate carbon cycling in terrestrial vegetation. We found that most state-of-the-art vegetation models used in the Coupled Model Intercomparison Project underestimated the radiocarbon accumulation in vegetation biomass. Our findings, combined with constraints on vegetation carbon stocks and productivity trends, imply that net primary productivity is likely at least 80 petagrams of carbon per year presently, compared with the 43 to 76 petagrams per year predicted by current models. Storage of anthropogenic carbon in terrestrial vegetation is likely more short-lived and vulnerable than previously predicted.

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  • Global Ocean Cooling of 2.3°C During the Last Glacial Maximum

    A. M. Seltzer, P. W. Davidson, S. A. Shackleton, D. P. Nicholson, S. Khatiwala

    Geophysical Research Letters   51 ( 9 )  2024.05

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    Abstract

    Quantitative constraints on past mean ocean temperature (MOT) critically inform our historical understanding of Earth's energy balance. A recently developed MOT proxy based on paleoatmospheric Xe, Kr, and N2 ratios in ice core air bubbles is a promising tool rooted in the temperature dependences of gas solubilities. However, these inert gases are systematically undersaturated in the modern ocean interior, and it remains unclear how air‐sea disequilibrium may have changed in the past. Here, we carry out 30 tracer‐enabled model simulations under varying circulation, sea ice cover, and wind stress regimes to evaluate air‐sea disequilibrium in the Last Glacial Maximum (LGM) ocean. We find that undersaturation of all three gases was likely reduced, primarily due to strengthened high‐latitude winds, biasing reconstructed MOT by −0.38 ± 0.37°C (1σ). Accounting for air‐sea disequilibrium, paleoatmospheric inert gases indicate that LGM MOT was 2.27 ± 0.46°C (1σ) colder than the pre‐industrial era.

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  • Efficient spin-up of Earth System Models using sequence acceleration

    Samar Khatiwala

    Science Advances   10 ( 18 )  2024.05

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    Marine and terrestrial biogeochemical models are key components of the Earth System Models (ESMs) used to project future environmental changes. However, their slow adjustment time also hinders effective use of ESMs because of the enormous computational resources required to integrate them to a pre-industrial equilibrium. Here, a solution to this "spin-up" problem based on "sequence acceleration", is shown to accelerate equilibration of state-of-the-art marine biogeochemical models by over an order of magnitude. The technique can be applied in a "black box" fashion to existing models. Even under the challenging spin-up protocols used for Intergovernmental Panel on Climate Change (IPCC) simulations, this algorithm is 5 times faster. Preliminary results suggest that terrestrial models can be similarly accelerated, enabling a quantification of major parametric uncertainties in ESMs, improved estimates of metrics such as climate sensitivity, and higher model resolution than currently feasible.

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  • Semi-implicit Solver for the Heat Equation with Stefan–Boltzmann Law Boundary Condition

    Norbert Schörghofer, Samar Khatiwala

    The Planetary Science Journal   5 ( 5 ) 120 - 120  2024.05

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    Abstract

    The surface energy balance on an atmosphereless body consists of solar irradiance, subsurface heat conduction, and thermal radiation to space by the Stefan–Boltzmann law. Here we extend the semi-implicit Crank–Nicolson method to this specific nonlinear boundary condition and validate its accuracy. A rapid change in incoming solar flux can cause a numerical instability, and several approaches to dampen this instability are analyzed. A predictor based on the Volterra integral equation formulation for the heat equation is also derived and can be used to improve accuracy and stability. The publicly available implementation provides a fast and robust thermophysical model that has been applied to lunar, Martian, and asteroidal surfaces, on occasion to millions of surface facets or parameter combinations.

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  • Dissolved gases in the deep North Atlantic track ocean ventilation processes

    Alan M. Seltzer, David P. Nicholson, William M. Smethie, Rebecca L. Tyne, Emilie Le Roy, Rachel H. R. Stanley, Martin Stute, Peter H. Barry, Katelyn McPaul, Perrin W. Davidson, Bonnie X. Chang, Patrick A. Rafter, Paul Lethaby, Rod J. Johnson, Samar Khatiwala, William J. Jenkins

    Proceedings of the National Academy of Sciences   120 ( 11 )  2023.03

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    Gas exchange between the atmosphere and ocean interior profoundly impacts global climate and biogeochemistry. However, our understanding of the relevant physical processes remains limited by a scarcity of direct observations. Dissolved noble gases in the deep ocean are powerful tracers of physical air-sea interaction due to their chemical and biological inertness, yet their isotope ratios have remained underexplored. Here, we present high-precision noble gas isotope and elemental ratios from the deep North Atlantic (~32°N, 64°W) to evaluate gas exchange parameterizations using an ocean circulation model. The unprecedented precision of these data reveal deep-ocean undersaturation of heavy noble gases and isotopes resulting from cooling-driven air-to-sea gas transport associated with deep convection in the northern high latitudes. Our data also imply an underappreciated and large role for bubble-mediated gas exchange in the global air-sea transfer of sparingly soluble gases, including O 2 , N 2 , and SF 6 . Using noble gases to validate the physical representation of air-sea gas exchange in a model also provides a unique opportunity to distinguish physical from biogeochemical signals. As a case study, we compare dissolved N 2 /Ar measurements in the deep North Atlantic to physics-only model predictions, revealing excess N 2 from benthic denitrification in older deep waters (below 2.9 km). These data indicate that the rate of fixed N removal in the deep Northeastern Atlantic is at least three times higher than the global deep-ocean mean, suggesting tight coupling with organic carbon export and raising potential future implications for the marine N cycle.

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  • Fast Spin‐Up of Geochemical Tracers in Ocean Circulation and Climate Models

    Samar Khatiwala

    Journal of Advances in Modeling Earth Systems   15 ( 2 )  2023.01

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    Abstract

    Ocean geochemical tracers such as radiocarbon, protactinium and thorium isotopes, and noble gases are widely used to constrain a range of physical and biogeochemical processes in the ocean. However, their routine simulation in global ocean circulation and climate models is hindered by the computational expense of integrating them to a steady state. Here, a new approach to this long‐standing “spin‐up” problem is introduced to efficiently compute equilibrium distributions of such tracers in seasonally‐forced models. Based on “Anderson Acceleration,” a sequence acceleration technique developed in the 1960s to solve nonlinear integral equations, the new method is entirely “black box” and offers significant speed‐up over conventional direct time integration. Moreover, it requires no preconditioning, ensures tracer conservation and is fully consistent with the numerical time‐stepping scheme of the underlying model. It thus circumvents some of the drawbacks of other schemes such as matrix‐free Newton Krylov that have been proposed to address this problem. An implementation specifically tailored for the batch HPC systems on which ocean and climate models are typically run is described, and the method illustrated by applying it to a variety of geochemical tracer problems. The new method, which provides speed‐ups by over an order of magnitude, should make simulations of such tracers more feasible and enable their inclusion in climate change assessments such as IPCC.

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  • Influence of GEOTRACES data distribution and misfit function choice on objective parameter retrieval in a marine zinc cycle model

    Claudia Eisenring, Sophy E. Oliver, Samar Khatiwala, Gregory F. de Souza

    Biogeosciences   19 ( 21 ) 5079 - 5106  2022.11

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    Abstract. Biogeochemical model behaviour for micronutrients istypically hard to constrain because of the sparsity of observational data,the difficulty of determining parameters in situ, and uncertainties inobservations and models. Here, we assess the influence of data distribution,model uncertainty, and the misfit function on objective parameter optimisation ina model of the oceanic cycle of zinc (Zn), an essential micronutrient formarine phytoplankton with a long whole-ocean residence time. We aim toinvestigate whether observational constraints are sufficient forreconstruction of biogeochemical model behaviour, given that the Zn datacoverage provided by the GEOTRACES Intermediate Data Product 2017 is sparse.Furthermore, we aim to assess how optimisation results are affected by thechoice of the misfit function and by confounding factors such as analyticaluncertainty in the data or biases in the model related to either seasonalvariability or the larger-scale circulation. The model framework appliedherein combines a marine Zn cycling model with a state-of-the-art estimationof distribution algorithm (Covariance Matrix Adaption Evolution Strategy,CMA-ES) to optimise the model towards synthetic data in an ensemble of 26optimisations. Provided with a target field that can be perfectly reproducedby the model, optimisation retrieves parameter values perfectly regardlessof data coverage. As differences between the model and the system underlyingthe target field increase, the choice of the misfit function can greatly impactoptimisation results, while limitation of data coverage is in most cases ofsubordinate significance. In cases where optimisation to full or limiteddata coverage produces relatively distinct model behaviours, we find thatapplying a misfit metric that compensates for differences in data coveragebetween ocean basins considerably improves agreement between optimisationresults obtained with the two data situations.

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  • A derivative-free optimisation method for global ocean biogeochemical models

    Sophy Oliver, Coralia Cartis, Iris Kriest, Simon F. B Tett, Samar Khatiwala

    Geoscientific Model Development   15 ( 9 ) 3537 - 3554  2022.05

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    Abstract. The skill of global ocean biogeochemical models, and the earth system models in which they areembedded, can be improved by systematic calibration of the parameter values against observations.However, such tuning is seldom undertaken as these models are computationally very expensive.Here we investigate the performance of DFO-LS,a local, derivative-free optimisation algorithm which has been designed for computationally expensive models with irregularmodel–data misfit landscapes typical of biogeochemical models. We use DFO-LS to calibrate six parameters of a relatively complexglobal ocean biogeochemical model (MOPS) against synthetic dissolved oxygen, phosphate andnitrate “observations” from a reference run of the same model with a known parameter configuration.The performance of DFO-LS is compared with that of CMA-ES, another derivative-free algorithm thatwas applied in a previous study to the same model in one of the first successful attempts at calibrating aglobal model of this complexity. We find that DFO-LS successfully recovers five of the six parameters in approximately 40evaluations of the misfit function (each one requiring a 3000-year run of MOPS to equilibrium), while CMA-ESneeds over 1200 evaluations. Moreover, DFO-LS reached a “baseline” misfit, defined by observational noise,in just 11–14 evaluations, whereas CMA-ES required approximately 340 evaluations. We also find that the performance of DFO-LS is not significantly affected by observational sparsity, however fewer parameters were successfully optimised in the presence of observational uncertainty. The results presented heresuggest that DFO-LS is sufficiently inexpensive and robust to apply to the calibration of complex, global oceanbiogeochemical models.

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  • Building high accuracy emulators for scientific simulations with deep neural architecture search

    M F Kasim, D Watson-Parris, L Deaconu, S Oliver, P Hatfield, D H Froula, G Gregori, M Jarvis, S Khatiwala, J Korenaga, J Topp-Mugglestone, E Viezzer, S M Vinko

    Machine Learning: Science and Technology   3 ( 1 ) 015013 - 015013  2021.12

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    Abstract

    Computer simulations are invaluable tools for scientific discovery. However, accurate simulations are often slow to execute, which limits their applicability to extensive parameter exploration, large-scale data analysis, and uncertainty quantification. A promising route to accelerate simulations by building fast emulators with machine learning requires large training datasets, which can be prohibitively expensive to obtain with slow simulations. Here we present a method based on neural architecture search to build accurate emulators even with a limited number of training data. The method successfully emulates simulations in 10 scientific cases including astrophysics, climate science, biogeochemistry, high energy density physics, fusion energy, and seismology, using the same super-architecture, algorithm, and hyperparameters. Our approach also inherently provides emulator uncertainty estimation, adding further confidence in their use. We anticipate this work will accelerate research involving expensive simulations, allow more extensive parameters exploration, and enable new, previously unfeasible computational discovery.

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  • Future Changes in δ13C of Dissolved Inorganic Carbon in the Ocean

    Heather Graven, Elleanor Lamb, Daisy Blake, Samar Khatiwala

    Earth's Future   9 ( 12 )  2021.12

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    Abstract

    Emissions of carbon dioxide from fossil fuel combustion are reducing the ratio 13C/12C, δ13C, in atmospheric CO2 and in the carbon in the ocean and terrestrial biosphere that exchanges with the atmosphere on timescales of decades to centuries. Future changes to fossil fuel emissions vary across different scenarios and may cause decreases of more than 6% in atmospheric δ13CO2 between 1850 and 2100. The effects of these potential changes on the three‐dimensional distribution of δ13C in the ocean have not yet been investigated. Here, we use an ocean biogeochemical‐circulation model forced with a range of Shared Socioeconomic Pathway (SSP)‐based scenarios to simulate δ13C in ocean dissolved inorganic carbon from 1850 to 2100. In the future, vertical and horizontal δ13C gradients characteristic of the biological pump are reduced or reversed, relative to the preindustrial period, with the reversal occurring in higher emission scenarios. For the highest emission scenario, SSP5‐8.5, surface δ13C in the center of Pacific subtropical gyres falls from 2.2% in 1850 to −3.5% by 2100. In lower emission scenarios, δ13C in the surface ocean decreases but then rebounds. The relationship between anthropogenic carbon (Cant) and δ13C in the ocean shows a larger scatter in all scenarios, suggesting that uncertainties in δ13C‐based estimates of Cant may increase in the future. These simulations were run with fixed physical forcing and ocean circulation, providing a baseline of predicted δ13C. Further work is needed to investigate the impact of climate‐carbon cycle feedbacks on ocean δ13C changes.

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  • Decomposing the Oxygen Signal in the Ocean Interior: Beyond Decomposing Organic Matter

    Nicolas Cassar, David Nicholson, Samar Khatiwala, Ellen Cliff

    Geophysical Research Letters   48 ( 18 )  2021.09

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    Abstract

    In the subsurface ocean, O2 depleted because of organic matter remineralization is generally estimated based on apparent oxygen utilization (AOU). However, AOU is an imperfect measure of oxygen utilization because of O2 air‐sea disequilibrium at the site of deepwater formation. Recent methodological and instrumental advances have paved the way to further deconvolve the processes driving the O2 signature. Using numerical model simulations of the global ocean, we show that the measurements of the dissolved O2/Ar ratio, which so far have been confined to the ocean surface, can provide improved estimates of oxygen utilization, especially in regions where the disequilibrium at the site of deepwater formation is associated with physical processes. We discuss applications of this new approach and implications for the current tracers relying on O2 such as remineralization ratios, respiratory quotients, and preformed nutrients. Finally, we propose a new composite geochemical tracer, combining dissolved O2/Ar and phosphate concentration. Being insensitive to photosynthesis and respiration, the change in this new tracer reflects gas exchange at the air‐sea interface at the sites of deepwater formation.

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  • Glacial deep ocean deoxygenation driven by biologically mediated air–sea disequilibrium

    Ellen Cliff, Samar Khatiwala, Andreas Schmittner

    Nature Geoscience   14 ( 1 ) 43 - 50  2021.01

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  • The Influence of Warming Patterns on Passive Ocean Heat Uptake

    Emily Newsom, Laure Zanna, Samar Khatiwala, Jonathan M. Gregory

    Geophysical Research Letters   47 ( 18 )  2020.09

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    Abstract

    The climate's response to forcing depends on how efficiently heat is absorbed by the ocean. Much, if not most, of this ocean heat uptake results from the passive transport of warm surface waters into the ocean's interior. Here we examine how geographic patterns of surface warming influence the efficiency of this passive heat uptake process. We show that the average pattern of surface warming in CMIP5 damps passive ocean heat uptake efficiency by nearly 25%, as compared to homogeneous surface warming. This “pattern effect” occurs because strong ventilation and weak surface warming are robustly colocated, particularly in the Southern Ocean. However, variations in warming patterns across CMIP5 do not drive significant ensemble spread in passive ocean heat uptake efficiency. This spread is likely linked to intermodel differences in ocean circulation, which our idealized results suggest may be dominated by differences in Southern Ocean and subtropical ventilation processes.

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  • Air-sea disequilibrium enhances ocean carbon storage during glacial periods

    S. Khatiwala, A. Schmittner, J. Muglia

    Science Advances   5 ( 6 )  2019.06

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    Temperature and iron fertilization are more important in driving glacial-interglacial CO 2 cycles than previously thought.

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  • Global reconstruction of historical ocean heat storage and transport

    Laure Zanna, Samar Khatiwala, Jonathan M. Gregory, Jonathan Ison, Patrick Heimbach

    Proceedings of the National Academy of Sciences   116 ( 4 ) 1126 - 1131  2019.01

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    Significance

    Since the 19th century, rising greenhouse gas concentrations have caused the ocean to absorb most of the Earth’s excess heat and warm up. Before the 1990s, most ocean temperature measurements were above 700 m and therefore, insufficient for an accurate global estimate of ocean warming. We present a method to reconstruct ocean temperature changes with global, full-depth ocean coverage, revealing warming of 436J since 1871. Our reconstruction, which agrees with other estimates for the well-observed period, demonstrates that the ocean absorbed as much heat during 1921–1946 as during 1990–2015. Since the 1950s, up to one-half of excess heat in the Atlantic Ocean at midlatitudes has come from other regions via circulation-related changes in heat transport.

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  • Changes to the Air‐Sea Flux and Distribution of Radiocarbon in the Ocean Over the 21st Century

    Samar Khatiwala, Heather Graven, Sarah Payne, Patrick Heimbach

    Geophysical Research Letters   45 ( 11 ) 5617 - 5626  2018.06

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    Abstract

    We investigate the spatiotemporal evolution of radiocarbon (Δ14C) in the ocean over the 21st century under different scenarios for anthropogenic CO2 emissions and atmospheric CO2 and radiocarbon changes using a 3‐D ocean carbon cycle model. Strong decreases in atmospheric Δ14C in the high‐emission scenario result in strong outgassing of 14C over 2050–2100, causing Δ14C spatial gradients in the surface ocean and vertical gradients between the surface and intermediate waters to reverse sign. Surface Δ14C in the subtropical gyres is lower than Δ14C in Pacific Deep Water and Southern Ocean surface water in 2100. In the low‐emission scenario, ocean Δ14C remains slightly higher than in 1950 and relatively constant over 2050–2100. Over the next 20 years we find decadal changes in Δ14C of −30‰ to +5‰ in the upper 2 km of the ocean, which should be detectable with continued hydrographic surveys. Our simulations can help in planning future observations, and they provide a baseline for investigating natural or anthropogenic changes in ocean circulation using ocean Δ14C observations and models.

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  • Revision of global carbon fluxes based on a reassessment of oceanic and riverine carbon transport

    L. Resplandy, R. F. Keeling, C. Rödenbeck, B. B. Stephens, S. Khatiwala, K. B. Rodgers, M. C. Long, L. Bopp, P. P. Tans

    Nature Geoscience   11 ( 7 ) 504 - 509  2018.06

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  • On the origin of the marine zinc–silicon correlation

    Gregory F. de Souza, Samar P. Khatiwala, Mathis P. Hain, Susan H. Little, Derek Vance

    Earth and Planetary Science Letters   492   22 - 34  2018.06

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  • Agreement of CMIP5 Simulated and Observed Ocean Anthropogenic CO2 Uptake

    Benjamin Bronselaer, Michael Winton, Joellen Russell, Christopher L. Sabine, Samar Khatiwala

    Geophysical Research Letters   44 ( 24 )  2017.12

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    Abstract

    Previous studies found large biases between individual observational and model estimates of historical ocean anthropogenic carbon uptake. We show that the largest bias between the Coupled Model Intercomparison Project phase 5 (CMIP5) ensemble mean and between two observational estimates of ocean anthropogenic carbon is due to a difference in start date. After adjusting the CMIP5 and observational estimates to the 1791–1995 period, all three carbon uptake estimates agree to within 3 Pg of C, about 4% of the total. The CMIP5 ensemble mean spatial bias compared to the observations is generally smaller than the observational error, apart from a negative bias in the Southern Ocean and a positive bias in the Southern Indian and Pacific Oceans compensating each other in the global mean. This dipole pattern is likely due to an equatorward and weak bias in the position of Southern Hemisphere westerlies and lack of mode and intermediate water ventilation.

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  • Evaluation of the transport matrix method for simulation of ocean biogeochemical tracers

    Karin F. Kvale, Samar Khatiwala, Heiner Dietze, Iris Kriest, Andreas Oschlies

    Geoscientific Model Development   10 ( 6 ) 2425 - 2445  2017.06

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    Abstract. Conventional integration of Earth system and ocean models can accrue considerable computational expenses, particularly for marine biogeochemical applications. Offline numerical schemes in which only the biogeochemical tracers are time stepped and transported using a pre-computed circulation field can substantially reduce the burden and are thus an attractive alternative. One such scheme is the transport matrix method (TMM), which represents tracer transport as a sequence of sparse matrix–vector products that can be performed efficiently on distributed-memory computers. While the TMM has been used for a variety of geochemical and biogeochemical studies, to date the resulting solutions have not been comprehensively assessed against their online counterparts. Here, we present a detailed comparison of the two. It is based on simulations of the state-of-the-art biogeochemical sub-model embedded within the widely used coarse-resolution University of Victoria Earth System Climate Model (UVic ESCM). The default, non-linear advection scheme was first replaced with a linear, third-order upwind-biased advection scheme to satisfy the linearity requirement of the TMM. Transport matrices were extracted from an equilibrium run of the physical model and subsequently used to integrate the biogeochemical model offline to equilibrium. The identical biogeochemical model was also run online. Our simulations show that offline integration introduces some bias to biogeochemical quantities through the omission of the polar filtering used in UVic ESCM and in the offline application of time-dependent forcing fields, with high latitudes showing the largest differences with respect to the online model. Differences in other regions and in the seasonality of nutrients and phytoplankton distributions are found to be relatively minor, giving confidence that the TMM is a reliable tool for offline integration of complex biogeochemical models. Moreover, while UVic ESCM is a serial code, the TMM can be run on a parallel machine with no change to the underlying biogeochemical code, thus providing orders of magnitude speed-up over the online model.

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  • Silicon and zinc biogeochemical cycles coupled through the Southern Ocean

    Derek Vance, Susan H. Little, Gregory F. de Souza, Samar Khatiwala, Maeve C. Lohan, Rob Middag

    Nature Geoscience   10 ( 3 ) 202 - 206  2017.02

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  • Calibrating a global three-dimensional biogeochemical ocean model (MOPS-1.0)

    Iris Kriest, Volkmar Sauerland, Samar Khatiwala, Anand Srivastav, Andreas Oschlies

    Geoscientific Model Development   10 ( 1 ) 127 - 154  2017.01

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    Abstract. Global biogeochemical ocean models contain a variety of different biogeochemical components and often much simplified representations of complex dynamical interactions, which are described by many ( ≈ 10 to  ≈ 100) parameters. The values of many of these parameters are empirically difficult to constrain, due to the fact that in the models they represent processes for a range of different groups of organisms at the same time, while even for single species parameter values are often difficult to determine in situ. Therefore, these models are subject to a high level of parametric uncertainty. This may be of consequence for their skill with respect to accurately describing the relevant features of the present ocean, as well as their sensitivity to possible environmental changes. We here present a framework for the calibration of global biogeochemical ocean models on short and long timescales. The framework combines an offline approach for transport of biogeochemical tracers with an estimation of distribution algorithm (Covariance Matrix Adaption Evolution Strategy, CMA-ES). We explore the performance and capability of this framework by five different optimizations of six biogeochemical parameters of a global biogeochemical model, simulated over 3000 years. First, a twin experiment explores the feasibility of this approach. Four optimizations against a climatology of observations of annual mean dissolved nutrients and oxygen determine the extent to which different setups of the optimization influence model fit and parameter estimates. Because the misfit function applied focuses on the large-scale distribution of inorganic biogeochemical tracers, parameters that act on large spatial and temporal scales are determined earliest, and with the least spread. Parameters more closely tied to surface biology, which act on shorter timescales, are more difficult to determine. In particular, the search for optimum zooplankton parameters can benefit from a sound knowledge of maximum and minimum parameter values, leading to a more efficient optimization. It is encouraging that, although the misfit function does not contain any direct information about biogeochemical turnover, the optimized models nevertheless provide a better fit to observed global biogeochemical fluxes.

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  • Controls over Ocean Mesopelagic Interior Carbon Storage (COMICS): Fieldwork, Synthesis, and Modeling Efforts

    Richard J. Sanders, Stephanie A. Henson, Adrian P. Martin, Tom R. Anderson, Raffaele Bernardello, Peter Enderlein, Sophie Fielding, Sarah L. C. Giering, Manuela Hartmann, Morten Iversen, Samar Khatiwala, Phyllis Lam, Richard Lampitt, Daniel J. Mayor, Mark C. Moore, Eugene Murphy, Stuart C. Painter, Alex J. Poulton, Kevin Saw, Gabriele Stowasser, Geraint A. Tarling, Sinhue Torres-Valdes, Mark Trimmer, George A. Wolff, Andrew Yool, Mike Zubkov

    Frontiers in Marine Science   3  2016.08

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  • Noble gas tracers of ventilation during deep-water formation in the Weddell Sea

    D P Nicholson, S Khatiwala, P Heimbach

    IOP Conference Series: Earth and Environmental Science   35   012019 - 012019  2016.05

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  • Variability of sea ice melt and meteoric water input in the surface Labrador Current off Newfoundland

    M. Benetti, G. Reverdin, C. Pierre, S. Khatiwala, B. Tournadre, S. Olafsdottir, A. Naamar

    Journal of Geophysical Research: Oceans   121 ( 4 ) 2841 - 2855  2016.04

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    Abstract

    The respective contributions of saline (Atlantic and Pacific water) and freshwater (sea ice melt, meteoric water) components in the surface Labrador Current are quantified using salinity, δ18O, and nutrient data collected between 2012 and 2015 east of Newfoundland to investigate the seasonal variability of salinity in relation with the different freshwater contributions. Nutrient data indicate that the surface saline water is composed on average over 2012–2015 of roughly 62% Atlantic Water and 38% Pacific Water. A large salinity seasonal cycle of ≈ 1.5 peak‐to‐peak amplitude is found over the middle continental shelf, which is explained by the freshwater input seasonal variability: 2/3 of the amplitude of the salinity seasonal cycle can be explained by meteoric water input and 1/3 by the sea ice melt. A smaller seasonal salinity cycle (≈1.3) is observed over the inner shelf compared to the middle shelf, because of smaller variability in the large meteoric water inputs. Furthermore, the data reveal that sea ice melt (SIM) input was particularly important during July 2014, following a larger extension of sea ice over the Labrador shelf during the 2013/2014 winter season, compared to both previous winter seasons. Some patches of large SIM contribution observed during July 2014 and April 2015 were located on the continental slope or further offshore. The comparison of 2012–2015 data with data collected in 1994–1995 shows that the surface water over the Newfoundland shelf and slope is strongly affected by sea ice processes in both periods and suggests a larger contribution of brines over the slope during 1994–1995.

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  • Constraints on oceanic meridional heat transport from combined measurements of oxygen and carbon

    L. Resplandy, R. F. Keeling, B. B. Stephens, J. D. Bent, A. Jacobson, C. Rödenbeck, S. Khatiwala

    Climate Dynamics   47 ( 9-10 ) 3335 - 3357  2016.02

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  • Water mass age and aging driving chromophoric dissolved organic matter in the dark global ocean

    T. S. Catalá, I. Reche, M. Álvarez, S. Khatiwala, E. F. Guallart, V. M. Benítez‐Barrios, A. Fuentes‐Lema, C. Romera‐Castillo, M. Nieto‐Cid, C. Pelejero, E. Fraile‐Nuez, E. Ortega‐Retuerta, C. Marrasé, X. A. Álvarez‐Salgado

    Global Biogeochemical Cycles   29 ( 7 ) 917 - 934  2015.07

     View Summary

    Abstract

    The omnipresence of chromophoric dissolved organic matter (CDOM) in the open ocean enables its use as a tracer for biochemical processes throughout the global overturning circulation. We made an inventory of CDOM optical properties, ideal water age (τ), and apparent oxygen utilization (AOU) along the Atlantic, Indian, and Pacific Ocean waters sampled during the Malaspina 2010 expedition. A water mass analysis was applied to obtain intrinsic, hereinafter archetypal, values of τ, AOU, oxygen utilization rate (OUR), and CDOM absorption coefficients, spectral slopes and quantum yield for each one of the 22 water types intercepted during this circumnavigation. Archetypal values of AOU and OUR have been used to trace the differential influence of water mass aging and aging rates, respectively, on CDOM variables. Whereas the absorption coefficient at 325 nm (a325) and the fluorescence quantum yield at 340 nm (Φ340) increased, the spectral slope over the wavelength range 275–295 nm (S275–295) and the ratio of spectral slopes over the ranges 275–295 nm and 350–400 nm (SR) decreased significantly with water mass aging (AOU). Combination of the slope of the linear regression between archetypal AOU and a325 with the estimated global OUR allowed us to obtain a CDOM turnover time of 634 ± 120 years, which exceeds the flushing time of the dark ocean (>200 m) by 46%. This positive relationship supports the assumption of in situ production and accumulation of CDOM as a by‐product of microbial metabolism as water masses turn older. Furthermore, our data evidence that global‐scale CDOM quantity (a325) is more dependent on aging (AOU), whereas CDOM quality (S275–295, SR, Φ340) is more dependent on aging rate (OUR).

    DOI

  • The global ocean carbon cycle in ``State of the Climate in 2013''

    Jessica Blunden, Derek S. Arndt

    Bulletin of the American Meteorological Society   95 ( 7 ) S1 - S279  2014.07

    DOI

  • Causes and implications of persistent atmospheric carbon dioxide biases in Earth System Models

    F. M. Hoffman, J. T. Randerson, V. K. Arora, Q. Bao, P. Cadule, D. Ji, C. D. Jones, M. Kawamiya, S. Khatiwala, K. Lindsay, A. Obata, E. Shevliakova, K. D. Six, J. F. Tjiputra, E. M. Volodin, T. Wu

    Journal of Geophysical Research: Biogeosciences   119 ( 2 ) 141 - 162  2014.02

     View Summary

    The strength of feedbacks between a changing climate and future CO2 concentrations is uncertain and difficult to predict using Earth System Models (ESMs). We analyzed emission‐driven simulations—in which atmospheric CO2levels were computed prognostically—for historical (1850–2005) and future periods (Representative Concentration Pathway (RCP) 8.5 for 2006–2100) produced by 15 ESMs for the Fifth Phase of the Coupled Model Intercomparison Project (CMIP5). Comparison of ESM prognostic atmospheric CO2 over the historical period with observations indicated that ESMs, on average, had a small positive bias in predictions of contemporary atmospheric CO2. Weak ocean carbon uptake in many ESMs contributed to this bias, based on comparisons with observations of ocean and atmospheric anthropogenic carbon inventories. We found a significant linear relationship between contemporary atmospheric CO2 biases and future CO2levels for the multimodel ensemble. We used this relationship to create a contemporary CO2 tuned model (CCTM) estimate of the atmospheric CO2 trajectory for the 21st century. The CCTM yielded CO2estimates of 600±14 ppm at 2060 and 947±35 ppm at 2100, which were 21 ppm and 32 ppm below the multimodel mean during these two time periods. Using this emergent constraint approach, the likely ranges of future atmospheric CO2, CO2‐induced radiative forcing, and CO2‐induced temperature increases for the RCP 8.5 scenario were considerably narrowed compared to estimates from the full ESM ensemble. Our analysis provided evidence that much of the model‐to‐model variation in projected CO2 during the 21st century was tied to biases that existed during the observational era and that model differences in the representation of concentration‐carbon feedbacks and other slowly changing carbon cycle processes appear to be the primary driver of this variability. By improving models to more closely match the long‐term time series of CO2from Mauna Loa, our analysis suggests that uncertainties in future climate projections can be reduced.

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  • Anthropogenic CO2 estimates in the Southern Ocean: Storage partitioning in the different water masses

    Paula C. Pardo, F.F. Pérez, S. Khatiwala, A.F. Ríos

    Progress in Oceanography   120   230 - 242  2014.01

    DOI

  • The global ocean carbon cycle in ``State of the Climate in 2012''

    Jessica Blunden, Derek S. Arndt

    Bulletin of the American Meteorological Society   94 ( 8 ) S1 - S258  2013.08

     View Summary

    Editors note: For easy download the posted pdf of the State of the Climate for 2012 is a very low-resolution file. A high-resolution copy of the report is available by clicking here. Please be patient as it may take a few minutes for the high-resolution file to download.

    DOI

  • Global ocean storage of anthropogenic carbon

    S. Khatiwala, T. Tanhua, S. Mikaloff Fletcher, M. Gerber, S. C. Doney, H. D. Graven, N. Gruber, G. A. McKinley, A. Murata, A. F. Ríos, C. L. Sabine

    Biogeosciences   10 ( 4 ) 2169 - 2191  2013.04

     View Summary

    Abstract. The global ocean is a significant sink for anthropogenic carbon (Cant), absorbing roughly a third of human CO2 emitted over the industrial period. Robust estimates of the magnitude and variability of the storage and distribution of Cant in the ocean are therefore important for understanding the human impact on climate. In this synthesis we review observational and model-based estimates of the storage and transport of Cant in the ocean. We pay particular attention to the uncertainties and potential biases inherent in different inference schemes. On a global scale, three data-based estimates of the distribution and inventory of Cant are now available. While the inventories are found to agree within their uncertainty, there are considerable differences in the spatial distribution. We also present a review of the progress made in the application of inverse and data assimilation techniques which combine ocean interior estimates of Cant with numerical ocean circulation models. Such methods are especially useful for estimating the air–sea flux and interior transport of Cant, quantities that are otherwise difficult to observe directly. However, the results are found to be highly dependent on modeled circulation, with the spread due to different ocean models at least as large as that from the different observational methods used to estimate Cant. Our review also highlights the importance of repeat measurements of hydrographic and biogeochemical parameters to estimate the storage of Cant on decadal timescales in the presence of the variability in circulation that is neglected by other approaches. Data-based Cant estimates provide important constraints on forward ocean models, which exhibit both broad similarities and regional errors relative to the observational fields. A compilation of inventories of Cant gives us a "best" estimate of the global ocean inventory of anthropogenic carbon in 2010 of 155 ± 31 PgC (±20% uncertainty). This estimate includes a broad range of values, suggesting that a combination of approaches is necessary in order to achieve a robust quantification of the ocean sink of anthropogenic CO2.

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  • Global ocean carbon uptake: magnitude, variability and trends

    R. Wanninkhof, G. -H. Park, T. Takahashi, C. Sweeney, R. Feely, Y. Nojiri, N. Gruber, S. C. Doney, G. A. McKinley, A. Lenton, C. Le Quéré, C. Heinze, J. Schwinger, H. Graven, S. Khatiwala

    Biogeosciences   10 ( 3 ) 1983 - 2000  2013.03

     View Summary

    Abstract. The globally integrated sea–air anthropogenic carbon dioxide (CO2) flux from 1990 to 2009 is determined from models and data-based approaches as part of the Regional Carbon Cycle Assessment and Processes (RECCAP) project. Numerical methods include ocean inverse models, atmospheric inverse models, and ocean general circulation models with parameterized biogeochemistry (OBGCMs). The median value of different approaches shows good agreement in average uptake. The best estimate of anthropogenic CO2 uptake for the time period based on a compilation of approaches is −2.0 Pg C yr−1. The interannual variability in the sea–air flux is largely driven by large-scale climate re-organizations and is estimated at 0.2 Pg C yr−1 for the two decades with some systematic differences between approaches. The largest differences between approaches are seen in the decadal trends. The trends range from −0.13 (Pg C yr−1) decade−1 to −0.50 (Pg C yr−1) decade−1 for the two decades under investigation. The OBGCMs and the data-based sea–air CO2 flux estimates show appreciably smaller decadal trends than estimates based on changes in carbon inventory suggesting that methods capable of resolving shorter timescales are showing a slowing of the rate of ocean CO2 uptake. RECCAP model outputs for five decades show similar differences in trends between approaches.

    DOI

  • Changing controls on oceanic radiocarbon: New insights on shallow‐to‐deep ocean exchange and anthropogenic CO2 uptake

    H. D. Graven, N. Gruber, R. Key, S. Khatiwala, X. Giraud

    Journal of Geophysical Research: Oceans   117 ( C10 )  2012.10

     View Summary

    The injection of radiocarbon (14C) into the atmosphere by nuclear weapons testing in the 1950s and 1960s has provided a powerful tracer to investigate ocean physical and chemical processes. While the oceanic uptake of bomb‐derived 14C was primarily controlled by air‐sea exchange in the early decades after the bomb spike, we demonstrate that changes in oceanic 14C are now primarily controlled by shallow‐to‐deep ocean exchange, i.e., the same mechanism that governs anthropogenic CO2 uptake. This is a result of accumulated bomb 14C uptake that has rapidly decreased the air‐sea gradient of 14C/C (Δ14C) and shifted the main reservoir of bomb 14C from the atmosphere to the upper ocean. The air‐sea Δ14C gradient, reduced further by fossil fuel dilution, is now weaker than before weapons testing in most regions. Oceanic 14C, and particularly its temporal change, can now be used to study the oceanic uptake of anthropogenic CO2. We examine observed changes in oceanic Δ14C between the WOCE/SAVE (1988–1995) and the CLIVAR (2001–2007) eras and simulations with two ocean general circulation models, the Community Climate System Model (CCSM) and the Estimating the Circulation and Climate of the Ocean Model (ECCO). Observed oceanic Δ14C and its changes between the 1980s–90s and 2000s indicate that shallow‐to‐deep exchange is too efficient in ECCO and too sluggish in CCSM. These findings suggest that mean global oceanic uptake of anthropogenic CO2 between 1990 and 2007 is bounded by the ECCO‐based estimate of 2.3 Pg C yr−1 and the CCSM‐based estimate of 1.7 Pg C yr−1.

    DOI

  • The global ocean carbon cycle in ``State of the Climate in 2011''

    Sabine, C. L, R. A. Feely, R. Wanninkhof, T. Takahashi, S. Khatiwala, G.-H. Park

    Bulletin of the American Meteorological Society   93 ( 7 ) S1 - S282  2012.07

    DOI

  • Sensitivity analysis of simple global marine biogeochemical models

    I. Kriest, A. Oschlies, S. Khatiwala

    Global Biogeochemical Cycles   26 ( 2 )  2012.06

     View Summary

    This study presents results from 46 sensitivity experiments carried out with three structurally simple (2, 3, and 6 biogeochemical state variables, respectively) models of production, export and remineralization of organic phosphorus, coupled to a global ocean circulation model and integrated for 3000 years each. The models' skill is assessed via different misfit functions with respect to the observed global distributions of phosphate and oxygen. Across the different models, the global root‐mean square misfit with respect to observed phosphate and oxygen distributions is found to be particularly sensitive to changes in the remineralization length scale, and also to changes in simulated primary production. For this metric, changes in the production and decay of dissolved organic phosphorus as well as in zooplankton parameters are of lesser importance. For a misfit function accounting for the misfit of upper‐ocean tracers, however, production parameters and organic phosphorus dynamics play a larger role. Regional misfit patterns are investigated as indicators of potential model deficiencies, such as missing iron limitation, or deficiencies in the sinking and remineralization length scales. In particular, the gradient between phosphate concentrations in the northern North Pacific and the northern North Atlantic is controlled predominantly by the biogeochemical model parameters related to particle flux. For the combined 46 sensitivity experiments performed here, the global misfit to observed oxygen and phosphate distributions shows no clear relation to either simulated global primary or export production for either misfit metric employed. However, a relatively tight relationship that is very similar for the different model of different structural complexity is found between the model‐data misfit in oxygen and phosphate distributions to simulated meso‐ and bathypelagic particle flux. Best agreement with the observed tracer distributions is obtained for simulated particle fluxes that agree most closely with sediment trap data for a nominal depth of about 1000 m, or deeper.

    DOI

  • Simulation of anthropogenic CO<sub>2</sub> uptake in the CCSM3.1 ocean circulation-biogeochemical model: comparison with data-based estimates

    S. Wang, J. K. Moore, F. W. Primeau, S. Khatiwala

    Biogeosciences   9 ( 4 ) 1321 - 1336  2012.04

     View Summary

    Abstract. The global ocean has taken up a large fraction of the CO2 released by human activities since the industrial revolution. Quantifying the oceanic anthropogenic carbon (Cant) inventory and its variability is important for predicting the future global carbon cycle. The detailed comparison of data-based and model-based estimates is essential for the validation and continued improvement of our prediction capabilities. So far, three global estimates of oceanic Cant inventory that are "data-based" and independent of global ocean circulation models have been produced: one based on the Δ C* method, and two that are based on constraining surface-to-interior transport of tracers, the TTD method and a maximum entropy inversion method (GF). The GF method, in particular, is capable of reconstructing the history of Cant inventory through the industrial era. In the present study we use forward model simulations of the Community Climate System Model (CCSM3.1) to estimate the Cant inventory and compare the results with the data-based estimates. We also use the simulations to test several assumptions of the GF method, including the assumption of constant climate and circulation, which is common to all the data-based estimates. Though the integrated estimates of global Cant inventories are consistent with each other, the regional estimates show discrepancies up to 50 %. The CCSM3 model underestimates the total Cant inventory, in part due to weak mixing and ventilation in the North Atlantic and Southern Ocean. Analyses of different simulation results suggest that key assumptions about ocean circulation and air-sea disequilibrium in the GF method are generally valid on the global scale, but may introduce errors in Cant estimates on regional scales. The GF method should also be used with caution when predicting future oceanic anthropogenic carbon uptake.

    DOI

  • Ventilation of the deep ocean constrained with tracer observations and implications for radiocarbon estimates of ideal mean age

    S. Khatiwala, F. Primeau, M. Holzer

    Earth and Planetary Science Letters   325-326   116 - 125  2012.04

    DOI

  • The global ocean carbon cycle in ``State of the Climate in 2010''

    J. Blunden, D. S. Arndt, M. O. Baringer

    Bulletin of the American Meteorological Society   92 ( 6 ) S1 - S236  2011.06

     View Summary

    Several large-scale climate patterns influenced climate conditions and weather patterns across the globe during 2010. The transition from a warm El Niño phase at the beginning of the year to a cool La Niña phase by July contributed to many notable events, ranging from record wetness across much of Australia to historically low Eastern Pacific basin and near-record high North Atlantic basin hurricane activity. The remaining five main hurricane basins experienced below- to well-below-normal tropical cyclone activity. The negative phase of the Arctic Oscillation was a major driver of Northern Hemisphere temperature patterns during 2009/10 winter and again in late 2010. It contributed to record snowfall and unusually low temperatures over much of northern Eurasia and parts of the United States, while bringing above-normal temperatures to the high northern latitudes. The February Arctic Oscillation Index value was the most negative since records began in 1950.

    The 2010 average global land and ocean surface temperature was among the two warmest years on record. The Arctic continued to warm at about twice the rate of lower latitudes. The eastern and tropical Pacific Ocean cooled about 1°C from 2009 to 2010, reflecting the transition from the 2009/10 El Niño to the 2010/11 La Niña. Ocean heat fluxes contributed to warm sea surface temperature anomalies in the North Atlantic and the tropical Indian and western Pacific Oceans. Global integrals of upper ocean heat content for the past several years have reached values consistently higher than for all prior times in the record, demonstrating the dominant role of the ocean in the Earth's energy budget. Deep and abyssal waters of Antarctic origin have also trended warmer on average since the early 1990s. Lower tropospheric temperatures typically lag ENSO surface fluctuations by two to four months, thus the 2010 temperature was dominated by the warm phase El Niño conditions that occurred during the latter half of 2009 and early 2010 and was second warmest on record. The stratosphere continued to be anomalously cool.

    Annual global precipitation over land areas was about five percent above normal. Precipitation over the ocean was drier than normal after a wet year in 2009. Overall, saltier (higher evaporation) regions of the ocean surface continue to be anomalously salty, and fresher (higher precipitation) regions continue to be anomalously fresh. This salinity pattern, which has held since at least 2004, suggests an increase in the hydrological cycle.

    Sea ice conditions in the Arctic were significantly different than those in the Antarctic during the year. The annual minimum ice extent in the Arctic—reached in September—was the third lowest on record since 1979. In the Antarctic, zonally averaged sea ice extent reached an all-time record maximum from mid-June through late August and again from mid-November through early December. Corresponding record positive Southern Hemisphere Annular Mode Indices influenced the Antarctic sea ice extents.

    Greenland glaciers lost more mass than any other year in the decade-long record. The Greenland Ice Sheet lost a record amount of mass, as the melt rate was the highest since at least 1958, and the area and duration of the melting was greater than any year since at least 1978. High summer air temperatures and a longer melt season also caused a continued increase in the rate of ice mass loss from small glaciers and ice caps in the Canadian Arctic. Coastal sites in Alaska show continuous permafrost warming and sites in Alaska, Canada, and Russia indicate more significant warming in relatively cold permafrost than in warm permafrost in the same geographical area. With regional differences, permafrost temperatures are now up to 2°C warmer than they were 20 to 30 years ago. Preliminary data indicate there is a high probability that 2010 will be the 20th consecutive year that alpine glaciers have lost mass.

    Atmospheric greenhouse gas concentrations continued to rise and ozone depleting substances continued to decrease. Carbon dioxide increased by 2.60 ppm in 2010, a rate above both the 2009 and the 1980–2010 average rates. The global ocean carbon dioxide uptake for the 2009 transition period from La Niña to El Niño conditions, the most recent period for which analyzed data are available, is estimated to be similar to the long-term average. The 2010 Antarctic ozone hole was among the lowest 20% compared with other years since 1990, a result of warmer-than-average temperatures in the Antarctic stratosphere during austral winter between mid-July and early September.

    DOI

  • An inverse approach to estimate bubble-mediated air-sea gas flux from inert gas measurements

    Nicholson, D. P, S. R. Emerson, S. Khatiwala, R. C. Hamme

    The 6th International Symposium on Gas Transfer at Water Surfaces, Komori, S., W. McGillis and R. Kurose (Eds.), Kyoto University Press    2011

  • Towards an assessment of simple global marine biogeochemical models of different complexity

    I. Kriest, S. Khatiwala, A. Oschlies

    Progress in Oceanography   86 ( 3-4 ) 337 - 360  2010.09

    DOI

  • Dissolved organic carbon export and subsequent remineralization in the mesopelagic and bathypelagic realms of the North Atlantic basin

    Craig A. Carlson, Dennis A. Hansell, Norman B. Nelson, David A. Siegel, William M. Smethie, Samar Khatiwala, Meredith M. Meyers, Elisa Halewood

    Deep Sea Research Part II: Topical Studies in Oceanography   57 ( 16 ) 1433 - 1445  2010.08

    DOI

  • Where and how long ago was water in the western North Atlantic ventilated? Maximum entropy inversions of bottle data from WOCE line A20

    Mark Holzer, François W. Primeau, William M. Smethie, Samar Khatiwala

    Journal of Geophysical Research: Oceans   115 ( C7 )  2010.07

     View Summary

    A maximum entropy (ME) method is used to deconvolve tracer data for the joint distribution of locations and times since last ventilation. The deconvolutions utilize World Ocean Circulation Experiment line A20 repeat hydrography for CFC‐11, potential temperature, salinity, oxygen, and phosphate, as well as Global Ocean Data Analysis Project (GLODAP) radiocarbon data, combined with surface boundary conditions derived from the atmospheric history of CFC‐11 and the World Ocean Atlas 2005 and GLODAP databases. Because of the limited number of available tracers the deconvolutions are highly underdetermined, leading to large entropic uncertainties, which are quantified using the information entropy of relative to a prior distribution. Additional uncertainties resulting from data sparsity are estimated using a Monte Carlo approach and found to be of secondary importance. The ME deconvolutions objectively identify key water mass formation regions and quantify the local fraction of water of age τ or older last ventilated in each region. Ideal mean age and radiocarbon age are also estimated but found to have large entropic uncertainties that can be attributed to uncertainties in the partitioning of a given water parcel according to where it was last ventilated. Labrador/Irminger seawater (L water) is determined to be mostly less than ∼40 a old in the vicinity of the deep western boundary current (DWBC) at the northern end of A20 but several decades older where the DWBC recrosses the section further south, pointing to the importance of mixing via a multitude of eddy‐diffusive paths. Overflow water lies primarily below L water with young waters (τ ≲ 40 a) at middepth in the northern part of A20 and waters as old as ∼600 a below ∼3500 m.

    DOI

  • The global ocean carbon cycle in ``State of the Climate in 2009''

    D. S. Arndt, M. O. Baringer, M. R. Johnson

    Bulletin of the American Meteorological Society   91 ( 7 ) s1 - s222  2010.07

    DOI

  • Reconstruction of the history of anthropogenic CO2 concentrations in the ocean

    S. Khatiwala, F. Primeau, T. Hall

    Nature   462 ( 7271 ) 346 - 349  2009.11

    DOI

  • Towards explaining the Nd paradox using reversible scavenging in an ocean general circulation model

    Mark Siddall, Samar Khatiwala, Tina van de Flierdt, Kevin Jones, Steven L. Goldstein, Sidney Hemming, Robert F. Anderson

    Earth and Planetary Science Letters   274 ( 3-4 ) 448 - 461  2008.10

    DOI

  • Modeling the distribution of Nd isotopes in the oceans using an ocean general circulation model

    Kevin M. Jones, Samar P. Khatiwala, Steven L. Goldstein, Sidney R. Hemming, Tina van de Flierdt

    Earth and Planetary Science Letters   272 ( 3-4 ) 610 - 619  2008.08

    DOI

  • Fast spin up of Ocean biogeochemical models using matrix-free Newton–Krylov

    Samar Khatiwala

    Ocean Modelling   23 ( 3-4 ) 121 - 129  2008.01

    DOI

  • Fast dynamical spin-up of ocean general circulation models using Newton–Krylov methods

    Timothy M. Merlis, Samar Khatiwala

    Ocean Modelling   21 ( 3-4 ) 97 - 105  2008.01

    DOI

  • A computational framework for simulation of biogeochemical tracers in the ocean

    Samar Khatiwala

    Global Biogeochemical Cycles   21 ( 3 )  2007.07

     View Summary

    A novel computational framework is introduced for the efficient simulation of chemical and biological tracers in ocean models. The framework is based on the “transport matrix” formulation, a scheme for capturing the complex three‐dimensional transport of tracers in a general circulation model (GCM) as a sparse matrix, thus reducing the task of simulating tracers to a sequence of simple matrix‐vector products. The principal advantages of this formulation are efficiency and convenience. It is many orders of magnitude more efficient than GCMs, allowing us to address problems that are currently either difficult or unaffordable with GCMs. The scheme also allows us to quickly “prototype” new biogeochemical parameterizations or “plug in” existing ones. This paper describes the key features and advantages of the transport matrix method, and illustrates its application to a series of realistic problems in chemical and biological oceanography. The examples range from simulation of a transient tracer (SF6) to adjoint sensitivity of a complex coupled biogeochemical model. Finally, the paper describes an efficient, portable, and freely available implementation of this computational scheme that provides the necessary framework for simulating any biogeochemical tracer.

    DOI

  • Hydrography of chromophoric dissolved organic matter in the North Atlantic

    Norman B. Nelson, David A. Siegel, Craig. A. Carlson, Chantal Swan, William M. Smethie, Samar Khatiwala

    Deep Sea Research Part I: Oceanographic Research Papers   54 ( 5 ) 710 - 731  2007.05

    DOI

  • Uptake of natural and anthropogenic carbon by the Labrador Sea

    F. Terenzi, T. M. Hall, S. Khatiwala, C. B. Rodehacke, D. A. LeBel

    Geophysical Research Letters   34 ( 6 )  2007.03

     View Summary

    We apply to Classical Labrador Sea Water (CLSW) the transit‐time distribution (TTD) method to estimate the inventory and uptake of anthropogenic carbon dioxide (Cant). A model of TTDs representing bulk‐advection and diffusive mixing is constrained with CFC11 data. The constrained TTDs are used to propagate Cant into CLSW, allowing the air‐sea disequilibrium to evolve consistently. Cant in the Labrador Sea (LS) surface waters cannot keep pace with increasing atmospheric CO2 and is highly undersaturated. Our best estimate for 2001 is an anthropogenic inventory of 1.0 Gt C and an uptake of 0.02 Gt C/year. By additionally using the constraint of present‐day CO2 measurements, we estimate that the preindustrial LS was neutral or a weak source of CO2 to the atmosphere. Our estimates are subject to possible error due to the assumption of steady‐state transport and carbon biochemistry.

    DOI

  • Accelerated simulation of passive tracers in ocean circulation models

    Samar Khatiwala, Martin Visbeck, Mark A. Cane

    Ocean Modelling   9 ( 1 ) 51 - 69  2005.01

    DOI

  • Estimates of anthropogenic carbon in the Indian Ocean with allowance for mixing and time‐varying air‐sea CO2 disequilibrium

    Timothy M. Hall, Darryn W. Waugh, Thomas W. N. Haine, Paul E. Robbins, Samar Khatiwala

    Global Biogeochemical Cycles   18 ( 1 )  2004.02

     View Summary

    We apply to the Indian Ocean a novel technique to estimate the distribution, total mass, and net air‐sea flux of anthropogenic carbon. Chlorofluorocarbon data are used to constrain distributions of transit times from the surface to the interior that are constructed to accommodate a range of mixing scenarios, from no mixing (pure bulk advection) to strong mixing. The transit time distributions are then used to propagate to the interior the surface water history of anthropogenic carbon estimated in a way that includes temporal variation in CO2 air‐sea disequilibrium. By allowing for mixing in transport and for variable air‐sea disequilibrium, we remove two sources of positive bias common in other studies. We estimate that the anthropogenic carbon mass in the Indian Ocean was 14.3–20.5 Gt in 2000, and the net air‐sea flux was 0.26–0.36 Gt/yr. The upper bound of this range, the no‐mixing limit, generally coincides with previous studies, while the lower bound, the strong‐mixing limit, is significantly below previous studies.

    DOI

  • Generation of internal tides in an ocean of finite depth: analytical and numerical calculations

    S. Khatiwala

    Deep Sea Research Part I: Oceanographic Research Papers   50 ( 1 ) 3 - 21  2003.01

    DOI

  • Slope streaks on Mars: Correlations with surface properties and the potential role of water

    Norbert Schorghofer, Oded Aharonson, Samar Khatiwala

    Geophysical Research Letters   29 ( 23 )  2002.12

     View Summary

    The Mars Orbiter Camera on board the Mars Global Surveyor spacecraft has returned images of numerous dark streaks that are the result of down‐slope mass movement occurring under present‐day martian climatic conditions. We systematically analyze over 23,000 high‐resolution images and demonstrate that slope streaks form exclusively in regions of low thermal inertia (confirming earlier results), steep slopes, and, remarkably, only where peak temperatures exceed 275 K. The northernmost streaks, which form in the coldest environment, form preferentially on warmer south‐facing slopes. Repeat images of sites with slope streaks show changes only if the time interval between the two images includes the warm season. Surprisingly (in light of the theoretically short residence time of H2O close to the surface), the data support the possibility that small amounts of water are transiently present in low‐latitude near‐surface regions of Mars and undergo phase transitions at times of high insolation, triggering the observed mass movements.

    DOI

  • Decrease of river runoff in the upper waters of the Eurasian Basin, Arctic Ocean, between 1991 and 1996: Evidence from δ18O data

    Peter Schlosser, Robert Newton, Brenda Ekwurzel, Samar Khatiwala, Rick Mortlock, Rick Fairbanks

    Geophysical Research Letters   29 ( 9 )  2002.05

     View Summary

    Measurements of the H218O/H216O ratio of water from two sections crossing the Eurasian Basin in 1991 and 1996 show that the observed decrease in the freshwater contained in the upper waters of the Eurasian Basin during the 1990s is due to decrease in meteoric water (mainly river runoff). The decrease in meteoric water inventories between 1991 and 1996 calculated from balances of mass, salinity, δ18O, and PO4* is about 3 meters and accounts for basically the entire freshwater change inferred from salinity budgets. Climatological data are used to ensure that the two sections can be considered to belong to the same hydrographic regime. The data also suggest that in 96 the formation of sea ice from the upper waters in the Amundsen Basin was lower by about 1 meter (3 m in 1996 compared to 4 m in 1991).

    DOI

  • Rates and mechanisms of water mass transformation in the Labrador Sea as inferred from tracer observations

    Khatiwala, S, P. Schlosser, M. Visbeck

    J. Phys. Oceanogr.    2002

    DOI

  • Enhanced sensitivity of persistent events to weak forcing in dynamical and stochastic systems: Implications for climate change

    Samar Khatiwala, Bruce E. Shaw, Mark A. Cane

    Geophysical Research Letters   28 ( 13 ) 2633 - 2636  2001.07

     View Summary

    Low‐dimensional models can give insight into the climate system, in particular its response to externally imposed forcing such as the anthropogenic emission of green‐house gases. Here, we use the Lorenz system, a chaotic dynamical system characterized by two “regimes”, to examine the effect of a weak imposed forcing. We show that the probability density functions (PDF's) of time‐spent in the two regimes are exponential, and that the most dramatic response to forcing is a change in the frequency of occurrence of extremely persistent events, rather than the weaker change in the mean persistence time. This enhanced sensitivity of the “tails” of the PDF's to forcing is quantitatively explained by changes in the stability of the regimes. We demonstrate similar behavior in a stochastically forced double well system. Our results suggest that the most significant effect of anthropogenic forcing may be to change the frequency of occurrence of persistent climate events, such as droughts, rather than the mean.

    DOI

  • Age tracers in an ocean GCM

    S. Khatiwala, M. Visbeck, P. Schlosser

    Deep Sea Research Part I: Oceanographic Research Papers   48 ( 6 ) 1423 - 1441  2001.06

    DOI

  • An estimate of the eddy‐induced circulation in the Labrador Sea

    Samar Khatiwala, Martin Visbeck

    Geophysical Research Letters   27 ( 15 ) 2277 - 2280  2000.08

     View Summary

    Regions of oceanic deep convection such as the Labrador Sea are prone to baroclinic instability. The resulting geostrophic eddies play a crucial role in the post‐convection adjustment process which involves both rearrangement of mass so as to release available potential energy and exchange of heat and salt with the boundaries. In this study it is proposed that the slumping of isopycnals associated with baroclinic instability drives an eddy‐induced “overturning circulation” consisting of a surface intensified flow transporting low salinity water from the boundary currents into the interior; sinking motion in the interior; and an “outflow” at depth transporting newly ventilated Labrador Sea Water towards the boundaries. Typical eddy‐induced velocities estimated from hydrographic data are roughly 0.5 cm/s for the surface inflow, 1 m/day for the vertical motion, and 0.1 cm/s for the deeper outflow, in close agreement with those calculated in a numerical model.

    DOI

  • Tracer Studies of the Arctic Freshwater Budget

    P. Schlosser, B. Ekwurzel, S. Khatiwala, B. Newton, W. Maslowski, S. Pfirman

    The Freshwater Budget of the Arctic Ocean     453 - 478  2000

    DOI

  • Pathways and mean residence times of dissolved pollutants in the ocean derived from transient tracers and stable isotopes

    P. Schlosser, R. Bayer, G. Bönisch, L.W. Cooper, B. Ekwurzel, W.J. Jenkins, S. Khatiwala, S. Pfirman, W.M. Smethie

    Science of The Total Environment   237-238   15 - 30  1999.09

    DOI

  • Freshwater sources to the coastal ocean off northeastern North America: Evidence from H218O/H216O

    Samar P. Khatiwala, Richard G. Fairbanks, Robert W. Houghton

    Journal of Geophysical Research: Oceans   104 ( C8 ) 18241 - 18255  1999.08

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    Oxygen isotope (H218O/H216O)/salinity data identify freshwater sources along the northeastern North American continental margin. The oxygen isotope (δ18O)‐salinity (S) properties of various water types are distinguished. Sea ice formation on the Labrador Shelf is shown to influence δ18O‐S values. It is estimated that 2–3 m of freshwater is extracted from the water column to form sea ice. It is hypothesized that waters on the Scotian Shelf, Gulf of Maine, and the Middle Atlantic Bight are composed of slope water diluted by an upstream low‐salinity source. This upstream source is a mixture of brine‐enriched Labrador Shelf Water and St. Lawrence River water. The δ18O value of the apparent freshwater component (δ18OS=0) of waters on the Scotian Shelf and farther south is ≈−20‰, which has been used to suggest a sole high‐latitude freshwater source. We show instead that the St. Lawrence River contributes ≈35% of the freshwater on the Scotian Shelf, in agreement with the physical oceanographic evidence. The remaining freshwater is supplied by high‐latitude rivers dominated by Arctic runoff. Finally, the isotope evidence identifies Baffin Bay as an important pathway by which freshwater from the Arctic Ocean can reach the Labrador Sea.

    DOI

  • Isotope data from Ice Station Weddell: Implications for deep water formation in the Weddell Sea

    R. Weppernig, P. Schlosser, S. Khatiwala, R. G. Fairbanks

    Journal of Geophysical Research: Oceans   101 ( C11 ) 25723 - 25739  1996.11

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    Helium isotope data (3He/4He ratios and 4He concentrations) and H218O/H216O ratios obtained from stations occupied during the drift of Ice Station Weddell (February to June 1992) are used, together with hydrographic data, to study formation of deep and bottom water in the western Weddell Sea. The data indicate deep and bottom water formation along the entire track of the ice station (71.4 to 65.8°S, ≈53°W). Ice Shelf Water (ISW) seems to contribute significantly to the formation of Weddell Sea Deep Water (WSDW) and Weddell Sea Bottom Water (WSBW) in the southern part of the drift track. Toward the north, the fraction of ISW contained in WSDW/WSBW decreases. This trend is overlaid by high ISW fractions in the deep and bottom waters found in the vicinity of the Larsen Ice Shelf. The fraction of Western Shelf Water (WSW) in WSBW shows the opposite trend, increasing from south to north. The combined fraction of ISW and WSW in waters with potential temperatures below 0°C is about 20%, corresponding to a roughly 200 m thick layer. Overall, WSW seems to contribute approximately 2 to 3 times more water than ISW to the water column below the 0°C isotherm. Using the estimated flow of ISW over the sill north of the Filchner Depression of 1 Sv [Foldvik et al., 1985a] together with the ratio of WSW plus Winter Water (WW) to ISW, we calculate a value of about 5 Sv for the formation rate of WSBW with a potential temperature of −0.7°C. About one third of this flux represents near‐surface waters (WSW/WW) which have recently been equilibrated with the atmosphere, whereas pure ISW contributes about 10%.

    DOI

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