Research Institute
-
2020-2022
理工学術院総合研究所 兼任研究員
Details of a Researcher
Updated on 2022/05/19
理工学術院総合研究所 兼任研究員
The University of Tokyo
The University of Tokyo Graduate School, Division of Agricultural Science
The University of Tokyo
The University of Tokyo
The University of Tokyo Faculty of Agriculture
The University of Tokyo
(BLANK)
(BLANK)
Waseda University Graduate School of Science and Engineering Department of Integrative Bioscience and Biomedical Engineering
The University of Tokyo
The University of Tokyo Graduate School of Frontier Sciences, Department of Medical Genome Sciences
The University of Tokyo Graduate School of Frontier Sciences
The University of Tokyo Graduate School of Frontier Sciences, Department of Integrated Biosciences
The University of Tokyo Graduate School of Frontier Sciences, Department of Integrated Biosciences
The University of Tokyo
The University of Tokyo
The University of Tokyo The Faculty of Engineering
Tokyo Institute of Technology School of Bioscience and Biotechnology
Tokyo Institute of Technology Interdisciplinary Science and Engineering
Yokohama City University
マックス-プランク実験医学研究所 化学部 博士研究員
THE BIOPHYSICAL SOCIETY OF JAPAN
The RNA Society of Japan
無細胞生命科学研究会
農芸化学会
生化学会
分子生物学会
Structural biochemistry
Molecular biology
Chemistry and chemical methodology of biomolecules
Biophysics
Functional biochemistry
Biofunction and bioprocess engineering
Molecular biology
リボソーム
生体外蛋白質合成系
tRNA
シャペロン
フォールディング
遺伝暗号
抗体
コドン
アミノアシルtRNA合成酵素
rRNA
蛋白質合成系
終結因子
NMR
翻訳
翻訳終結
凝集
解離因子
変則暗号
GroEL
反転膜小胞
リボソーム蛋白質
系統樹
分子整形術
進化工学
Candida
開始因子
蛋白質相互作用
膜蛋白質
カンジダ
分子生物学
Molecular Biology
Interleukin-6 sensitizes TNF-α and TRAIL/Apo2L dependent cell death through upregulation of death receptors in human cancer cells
Emiko Sano, Akira Kazaana, Hisashi Tadakuma, Toshiaki Takei, Sodai Yoshimura, Yuya Hanashima, Yoshinari Ozawa, Atsuo Yoshino, Yutaka Suzuki, Takuya Ueda
Biochimica et Biophysica Acta - Molecular Cell Research 1868 ( 7 ) 2021.06
Laurent Geffroy, Thierry Bizebard, Ryo Aoyama, Takuya Ueda, Ulrich Bockelmann
RNA 25 ( 4 ) 472 - 480 2021.04 [Refereed]
Snapshots of native pre-50S ribosomes reveal a biogenesis factor network and evolutionary specialization
Rainer Nikolay, Tarek Hilal, Sabine Schmidt, Bo Qin, David Schwefel, Carlos H. Vieira-Vieira, Thorsten Mielke, Jörg Bürger, Justus Loerke, Kazuaki Amikura, Timo Flügel, Takuya Ueda, Matthias Selbach, Elke Deuerling, Christian M.T. Spahn
Molecular Cell 81 ( 6 ) 1200 - 1215.e9 2021.03
Masaru Shimojo, Kazuaki Amikura, Keiko Masuda, Takashi Kanamori, Takuya Ueda, Yoshihiro Shimizu
Communications Biology 3 ( 1 ) 142 - 142 2020.12 [Refereed]
Antitumor effects of ribavirin in combination with TMZ and IFN-β in malignant glioma cells
Yushi Ochiai, Koichiro Sumi, Emiko Sano, Sodai Yoshimura, Shun Yamamuro, Akiyoshi Ogino, Takuya Ueda, Yutaka Suzuki, Tomohiro Nakayama, Hiroyuki Hara, Yoichi Katayama, Atsuo Yoshino
Oncology Letters 20 ( 5 ) 2020.11
The bacterial protein YidC accelerates MPIase-dependent integration of membrane proteins
Masaru Sasaki, Hanako Nishikawa, Sonomi Suzuki, Michael Moser, Maria Huber, Katsuhiro Sawasato, Hideaki T. Matsubayashi, Kaoru Kumazaki, Tomoya Tsukazaki, Yutetsu Kuruma, Osamu Nureki, Takuya Ueda, Ken Ichi Nishiyama
Journal of Biological Chemistry 294 ( 49 ) 18898 - 18908 2019.12 [Refereed]
Katsuhiro Sawasato, Ryo Sato, Hanako Nishikawa, Naoki Iimura, Yuki Kamemoto, Kohki Fujikawa, Toshiyuki Yamaguchi, Yutetsu Kuruma, Yasushi Tamura, Toshiya Endo, Takuya Ueda, Keiko Shimamoto, Ken ichi Nishiyama
Scientific Reports 9 ( 1 ) 2019.12 [Refereed]
Artificial photosynthetic cell producing energy for protein synthesis
Samuel Berhanu, Takuya Ueda, Yutetsu Kuruma
Nature Communications 10 ( 1 ) 2019.12 [Refereed]
Akira Kazaana, Emiko Sano, Sodai Yoshimura, Kotaro Makita, Hiroyuki Hara, Atsuo Yoshino, Takuya Ueda
Journal of Cellular Physiology 234 ( 8 ) 13510 - 13524 2019.08 [Refereed]
Kotaro Makita, Hiroyuki Hara, Emiko Sano, Yutaka Okamoto, Yushi Ochiai, Tomonori Harada, Takuya Ueda, Tomohiro Nakayama, Shin Aizawa, Atsuo Yoshino
International Journal of Oncology 54 ( 5 ) 1864 - 1874 2019.04 [Refereed]
High-resolution crystal structure of peptidyl-tRNA hydrolase from Thermus thermophilus
Ami Matsumoto, Yuji Uehara, Yoshihiro Shimizu, Takuya Ueda, Toshio Uchiumi, Kosuke Ito
Proteins: Structure, Function and Bioinformatics 87 ( 3 ) 226 - 235 2019.03 [Refereed] [International journal]
IFN‑β sensitizes TRAIL‑induced apoptosis by upregulation of death receptor 5 in malignant glioma cells
Sodai Yoshimura, Emiko Sano, Yuya Hanashima, Shun Yamamuro, Koichiro Sumi, Takuya Ueda, Tomohiro Nakayama, Hiroyuki Hara, Atsuo Yoshino, Yoichi Katayama
Oncology Reports 42 ( 6 ) 2635 - 2643 2019
Eri Uemura, Tatsuya Niwa, Shintaro Minami, Kazuhiro Takemoto, Satoshi Fukuchi, Kodai Machida, Hiroaki Imataka, Takuya Ueda, Motonori Ota, Hideki Taguchi
Scientific Reports 8 ( 1 ) 2018.12 [Refereed]
Belay Gessesse, Takashi Nagaike, Koji Nagata, Yoshihiro Shimizu, Takuya Ueda
Life 8 ( 4 ) 2018.12 [Refereed] [International journal]
Shun Yamamuro, Yuya Hanashima, Sodai Yoshimura, Emiko Sano, Takuya Ueda, Atsuo Yoshino
Neuro-Oncology 20 ( suppl_6 ) vi249 - vi249 2018.11 [Refereed]
Reconstitution of 30S ribosomal subunits in vitro using ribosome biogenesis factors
Daichi Tamaru, Kazuaki Amikura, Yoshihiro Shimizu, Knud H. Nierhaus, Takuya Ueda
RNA 24 ( 11 ) 1512 - 1519 2018.11 [Refereed]
Construction of integrated gene logic-chip
Takeya Masubuchi, Masayuki Endo, Ryo Iizuka, Ayaka Iguchi, Dong Hyun Yoon, Tetsushi Sekiguchi, Hao Qi, Ryosuke Iinuma, Yuya Miyazono, Shuichi Shoji, Takashi Funatsu, Hiroshi Sugiyama, Yoshie Harada, Takuya Ueda, Hisashi Tadakuma
Nature Nanotechnology 13 ( 10 ) 933 - 940 2018.10 [Refereed]
Takumi Furusato, Fumihiro Horie, Hideaki T. Matsubayashi, Kazuaki Amikura, Yutetsu Kuruma, Takuya Ueda
ACS Synthetic Biology 7 ( 4 ) 953 - 961 2018.04 [Refereed]
Efficacy of ribavirin against malignant glioma cell lines: Follow-up study
Yushi Ochiai, Emiko Sano, Yutaka Okamoto, Sodai Yoshimura, Kotaro Makita, Shun Yamamuro, Takashi Ohta, Akiyoshi Ogino, Hisashi Tadakuma, Takuya Ueda, Tomohiro Nakayama, Hiroyuki Hara, Atsuo Yoshino, Yoichi Katayama
Oncology Reports 39 ( 2 ) 537 - 544 2018.02 [Refereed]
Production and characterization of genetically modified human IL-11 variants
Emiko Sano, Toshiaki Takei, Takuya Ueda, Kouhei Tsumoto
BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS 1861 ( 2 ) 205 - 217 2017.02 [Refereed]
Cell-free translation system: Development in biochemistry and advance in synthetic biology
Kanamori, Takashi, Nagaike, Takashi, Kuruma, Yutetsu, Ueda, Takuya, Corporation, Genefrontier, Plaza, Todai-kashiwa Venture
Journal of Japanese Biochemical Society 89 ( 2 ) 211 - 220 2017 [Refereed]
Bo Qin, Hiroshi Yamamoto, Takuya Ueda, Umesh Varshney, Knud H. Nierhaus
JOURNAL OF MOLECULAR BIOLOGY 428 ( 18 ) 3577 - 3587 2016.09 [Refereed]
The PURE system for the cell-free synthesis of membrane proteins (vol 10, pg 1328, 2015)
Yutetsu Kuruma, Takuya Ueda
NATURE PROTOCOLS 11 ( 3 ) 616 - 616 2016.03 [Refereed]
Rayakorn Yutthanasirikul, Takanori Nagano, Haruhiko Jimbo, Yukako Hihara, Takashi Kanamori, Takuya Ueda, Takamitsu Haruyama, Hiroki Konno, Keisuke Yoshida, Toru Hisabori, Yoshitaka Nishiyama
JOURNAL OF BIOLOGICAL CHEMISTRY 291 ( 11 ) 5860 - 5870 2016.03 [Refereed]
70S-scanning initiation is a novel and frequent initiation mode of ribosomal translation in bacteria
Hiroshi Yamamoto, Daniela Wittek, Romi Gupta, Bo Qin, Takuya Ueda, Roland Krause, Kaori Yamamoto, Renate Albrecht, Markus Pech, Knud H. Nierhaus
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 113 ( 9 ) E1180 - E1189 2016.03 [Refereed]
RNA Study Using DNA Nanotechnology
Hisashi Tadakuma, Takeya Masubuchi, Takuya Ueda
NANOTECHNOLOGY TOOLS FOR THE STUDY OF RNA 139 121 - 163 2016 [Refereed]
Tatsuya Niwa, Yoshihiro Sasaki, Eri Uemura, Shugo Nakamura, Minato Akiyama, Mitsuru Ando, Shinichi Sawada, Sada-atu Mukai, Takuya Ueda, Hideki Taguchi, Kazunari Akiyoshi
SCIENTIFIC REPORTS 5 2015.12 [Refereed]
Antitumorigenic effect of interferon-beta by inhibition of undifferentiated glioblastoma cells
Shun Yamamuro, Emiko Sano, Yutaka Okamoto, Yushi Ochiai, Takashi Ohta, Akiyoshi Ogino, Atsushi Natsume, Toshihiko Wakabayashi, Takuya Ueda, Hiroyuki Hara, Tomohiro Nakayama, Atsuo Yoshino, Yoichi Katayama
INTERNATIONAL JOURNAL OF ONCOLOGY 47 ( 5 ) 1647 - 1654 2015.11 [Refereed]
Tatsuya Niwa, Ryota Sugimoto, Lisa Watanabe, Shugo Nakamura, Takuya Ueda, Hideki Taguchi
FRONTIERS IN MICROBIOLOGY 6 ( OCT ) 2015.10 [Refereed]
The PURE system for the cell-free synthesis of membrane proteins
Yutetsu Kuruma, Takuya Ueda
NATURE PROTOCOLS 10 ( 9 ) 1328 - 1344 2015.09 [Refereed]
Takanori Nagano, Rayakorn Yutthanasirikul, Yukako Hihara, Toru Hisabori, Takashi Kanamori, Nono Takeuchi, Takuya Ueda, Yoshitaka Nishiyama
JOURNAL OF BIOCHEMISTRY 158 ( 2 ) 165 - 172 2015.08 [Refereed]
Single-Molecule Analysis of the Target Cleavage Reaction by the Drosophila RNAi Enzyme Complex
Chunyan Yao, Hiroshi M. Sasaki, Takuya Ueda, Yukihide Tomari, Hisashi Tadakuma
MOLECULAR CELL 59 ( 1 ) 125 - 132 2015.07 [Refereed]
Characterization of glioma stem-like cells from human glioblastomas
Shun Yamamuro, Yutaka Okamoto, Emiko Sano, Yushi Ochiai, Akiyoshi Ogino, Takashi Ohta, Hiroyuki Hara, Takuya Ueda, Tomohiro Nakayama, Atsuo Yoshino, Yoichi Katayama
INTERNATIONAL JOURNAL OF ONCOLOGY 47 ( 1 ) 91 - 96 2015.07 [Refereed]
pH responsiveness of fibrous assemblies of repeat-sequence amphipathic alpha-helix polypeptides
Toshiaki Takei, Kouhei Tsumoto, Atsuhito Okonogi, Akiko Kimura, Shuichi Kojima, Kazumori Yazaki, Tsunetomo Takei, Takuya Ueda, Kin-ichiro Miura
PROTEIN SCIENCE 24 ( 5 ) 883 - 894 2015.05 [Refereed]
Emiko Sano, Shinya Tashiro, Kouhei Tsumoto, Takuya Ueda
BioResearch Open Access 4 ( 1 ) 1 - 15 2015.01 [Refereed]
Efficacy of ribavirin against malignant glioma cell lines
Akiyoshi Ogino, Emiko Sano, Yushi Ochiai, Shun Yamamuro, Shinya Tashiro, Kazunari Yachi, Takashi Ohta, Takao Fukushima, Yutaka Okamoto, Kouhei Tsumoto, Takuya Ueda, Atsuo Yoshino, Yoichi Katayama
ONCOLOGY LETTERS 8 ( 6 ) 2469 - 2474 2014.12 [Refereed]
Cell-Free Synthesis of SecYEG Translocon as the Fundamental Protein Transport Machinery
Hideaki Matsubayashi, Yutetsu Kuruma, Takuya Ueda
ORIGINS OF LIFE AND EVOLUTION OF BIOSPHERES 44 ( 4 ) 331 - 334 2014.12 [Refereed]
PURE ribosome display and its application in antibody technology
Takashi Kanamori, Yasuhiro Fujino, Takuya Ueda
BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS 1844 ( 11 ) 1925 - 1932 2014.11 [Refereed]
Purified cell-free systems as standard parts for synthetic biology
Hideaki Matsubayashi, Takuya Ueda
CURRENT OPINION IN CHEMICAL BIOLOGY 22 158 - 162 2014.10 [Refereed]
Transfer RNA Synthesis and Regulation
Hiroyuki Hori, Chie Tomikawa, Akira Hirata, Yukimatsu Toh, Kozo Tomita, Takuya Ueda, Kimitsuna Watanabe
eLS 2014.09
Shiori Akabane, Takuya Ueda, Knud H. Nierhaus, Nono Takeuchi
PLOS GENETICS 10 ( 9 ) e1004616 2014.09 [Refereed]
Protein synthesis yield increased 72 times in the cell-free PURE system
Kirsten Jackson, Takashi Kanamori, Takuya Ueda, Z. Hugh Fan
INTEGRATIVE BIOLOGY 6 ( 8 ) 781 - 788 2014.08 [Refereed]
In Vitro Synthesis of the E. coli Sec Translocon from DNA
Hideaki Matsubayashi, Yutetsu Kuruma, Takuya Ueda
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION 53 ( 29 ) 7535 - 7538 2014.07 [Refereed]
Toshiaki Takei, Kouhei Tsumoto, Masakuni Yoshino, Shuichi Kojima, Kazumori Yazaki, Takuya Ueda, Tsunetomo Takei, Fumio Arisaka, Kin-ichiro Miura
BIOPOLYMERS 102 ( 3 ) 260 - 272 2014.05 [Refereed]
Yufan Zhou, Takuya Ueda, Matthias Mueller
PLOS ONE 9 ( 4 ) 2014.04 [Refereed]
Matsubayashi Hideaki, Kuruma Yutetsu, Ueda Takuya
Seibutsu Butsuri 54 ( 1 ) S177 2014
The PURE system for protein production
Yoshihiro Shimizu, Yutetsu Kuruma, Takashi Kanamori, Takuya Ueda
Methods in Molecular Biology 1118 275 - 284 2014 [Refereed]
Cell-free protein synthesis system
Matsubayashi H, Ueda T
Kobunshi 63 ( 6 ) 379 - 381 2014 [Refereed]
NIWA Tatsuya, UEDA Takuya, TAGUCHI Hideki
Seibutsu Butsuri 53 ( 6 ) 309 - 312 2013.11
Takamitsu Yano, Nono Takeuchi-Tomita, Takuya Ueda, Richard H. Haas
MITOCHONDRION 13 ( 6 ) 924 - 925 2013.11 [Refereed]
Pauline van Nies, Zohreh Nourian, Maurits Kok, Roeland van Wijk, Jonne Moeskops, Ilja Westerlaken, Jos M. Poolman, Rienk Eelkema, Jan H. van Esch, Yutetsu Kuruma, Takuya Ueda, Christophe Danelon
CHEMBIOCHEM 14 ( 15 ) 1963 - 1966 2013.10 [Refereed]
Translation Enhancer Improves the Ribosome Liberation from Translation Initiation
Shuntaro Takahashi, Hiroyuki Furusawa, Takuya Ueda, Yoshio Okahata
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY 135 ( 35 ) 13096 - 13106 2013.09 [Refereed]
Rippei Hayashi, Nono Takeuchi, Takuya Ueda
JOURNAL OF MOLECULAR BIOLOGY 425 ( 18 ) 3536 - 3548 2013.09 [Refereed]
Shuntaro Takahashi, Hidemi Isobe, Takuya Ueda, Yoshio Okahata
CHEMISTRY-A EUROPEAN JOURNAL 19 ( 21 ) 6807 - 6816 2013.05 [Refereed]
Tetsuya Kotani, Shiori Akabane, Kunio Takeyasu, Takuya Ueda, Nono Takeuchi
Nucleic Acids Research 41 ( 6 ) 3713 - 3722 2013.04 [Refereed]
Toshiaki Takei, Kazuya Hasegawa, Katsumi Imada, Keiichi Namba, Kouhei Tsumoto, Yukino Kuriki, Masakuni Yoshino, Kazumori Yazaki, Shuichi Kojima, Tsunetomo Takei, Takuya Ueda, Kin-ichiro Miura
BIOCHEMISTRY 52 ( 16 ) 2810 - 2820 2013.04 [Refereed]
Ami Matsumoto, Yoshihiro Shimizu, Chie Takemoto, Takuya Ueda, Toshio Uchiumi, Kosuke Ito
Acta Crystallographica Section F: Structural Biology and Crystallization Communications 69 ( 3 ) 332 - 335 2013.03 [Refereed]
Ami Matsumoto, Yoshihiro Shimizu, Chie Takemoto, Takuya Ueda, Toshio Uchiumi, Kosuke Ito
Acta Crystallographica Section F: Structural Biology and Crystallization Communications 69 ( 3 ) 332 - 335 2013.03 [Refereed]
Niwa Tatsuya, Tadakuma Hisashi, Ito Koichi, Ueda Takuya, Taguchi Hideki
Seibutsu Butsuri 53 ( 1 ) S224 2013
Masubuchi Takeya, Tadakuma Hisashi, Endo Masayuki, Sugiyama Hiroshi, Harada Yoshie, Ueda Takuya
Seibutsu Butsuri 53 ( 1 ) S262 2013
Emiko Sano, Shinnya Tashiro, Hisashi Tadakuma, Toshiaki Takei, Takuya Ueda, Kouhei Tsumoto
JOURNAL OF CELLULAR BIOCHEMISTRY 113 ( 12 ) 3823 - 3834 2012.12 [Refereed]
Structural basis for the substrate recognition and catalysis of peptidyl-tRNA hydrolase
Kosuke Ito, Ryo Murakami, Masahiro Mochizuki, Hao Qi, Yoshihiro Shimizu, Kin-ichiro Miura, Takuya Ueda, Toshio Uchiumi
NUCLEIC ACIDS RESEARCH 40 ( 20 ) 10521 - 10531 2012.11 [Refereed]
Yasuhiro Fujino, Risako Fujita, Kouichi Wada, Kotomi Fujishige, Takashi Kanamori, Lindsey Hunt, Yoshihiro Shimizu, Takuya Ueda
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS 428 ( 3 ) 395 - 400 2012.11 [Refereed]
Crystal structure analysis of the translation factor RF3 (release factor 3)
Kiyohito Kihira, Yoshihiro Shimizu, Yasuhito Shomura, Naoki Shibata, Masaya Kitamura, Atsushi Nakagawa, Takuya Ueda, Kozo Ochi, Yoshiki Higuchi
FEBS LETTERS 586 ( 20 ) 3705 - 3709 2012.10 [Refereed]
Takanori Nagano, Kouji Kojima, Toru Hisabori, Hidenori Hayashi, Eugene Hayato Morita, Takashi Kanamori, Tomoko Miyagi, Takuya Ueda, Yoshitaka Nishiyama
JOURNAL OF BIOLOGICAL CHEMISTRY 287 ( 34 ) 28697 - 28704 2012.08 [Refereed]
Target Specificity of an Autoreactive Pathogenic Human gamma delta-T Cell Receptor in Myositis
Jessica Bruder, Katherina Siewert, Birgit Obermeier, Joachim Malotka, Peter Scheinert, Josef Kellermann, Takuya Ueda, Reinhard Hohlfeld, Klaus Dornmair
JOURNAL OF BIOLOGICAL CHEMISTRY 287 ( 25 ) 20986 - 20995 2012.06 [Refereed]
Global analysis of chaperone effects using a reconstituted cell-free translation system
Tatsuya Niwa, Takashi Kanamori, Takuya Ueda, Hideki Taguchi
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 109 ( 23 ) 8937 - 8942 2012.06 [Refereed]
Shuntaro Takahashi, Kentaro Tsuji, Takuya Ueda, Yoshio Okahata
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY 134 ( 15 ) 6793 - 6800 2012.04 [Refereed]
Functional analysis of membranous F-0-a subunit of F1F0-ATP synthase by in vitro protein synthesis
Yutetsu Kuruma, Toshiharu Suzuki, Sakurako Ono, Masasuke Yoshida, Takuya Ueda
BIOCHEMICAL JOURNAL 442 ( 3 ) 631 - 638 2012.03 [Refereed]
Functional analysis of membranous F-0-a subunit of F1F0-ATP synthase by in vitro protein synthesis
Yutetsu Kuruma, Toshiharu Suzuki, Sakurako Ono, Masasuke Yoshida, Takuya Ueda
BIOCHEMICAL JOURNAL 442 631 - 638 2012.03 [Refereed]
1B1510 Global analysis of aggregation-inhibotion effects of molecular chaperones using a reconstituted cell-free translation system(Proteins: Structure & Function I,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)
Niwa Tatsuya, Ueda Takuya, Taguchi Hideki
Seibutsu Butsuri 52 S21 - S22 2012
1PS042 Multiple kinesin molecules coordinate to ensure the long-distance walking : a DNA-kinesin hybrid nanomachine study(The 50th Annual Meeting of the Biophysical Society of Japan)
Miyazono Yuya, Endo Masayuki, Ueda Takuya, Sugiyama Hiroshi, Harada Yoshie, Tadakuma Hisashi
Seibutsu Butsuri 52 S81 2012
Peptide screening using pure ribosome display
Hiroyuki Ohashi, Takashi Kanamori, Eriko Osada, Bintang K. Akbar, Takuya Ueda
Methods in Molecular Biology 805 251 - 259 2012 [Refereed]
Kosuke Ito, Hao Qi, Yoshihiro Shimizu, Ryo Murakami, Kin-ichiro Miura, Takuya Ueda, Toshio Uchiumi
ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY AND CRYSTALLIZATION COMMUNICATIONS 67 ( Pt 12 ) 1566 - 1569 2011.12 [Refereed]
Creation of biosystems in a testtube
Takuya Ueda
GENES & GENETIC SYSTEMS 86 ( 6 ) 395 - 395 2011.12 [Refereed]
Kosuke Ito, Hao Qi, Yoshihiro Shimizu, Ryo Murakami, Kin-ichiro Miura, Takuya Ueda, Toshio Uchiumi
ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY AND CRYSTALLIZATION COMMUNICATIONS 67 1566 - 1569 2011.12 [Refereed]
Chikayoshi Yatomi, Takuya Ueda, Shintaro Takagi, Takahiro Abe
Zairyo/Journal of the Society of Materials Science, Japan 60 ( 11 ) 1031 - 1036 2011.11 [Refereed]
Amphiphilic Polysaccharide Nanogels as Artificial Chaperones in Cell-Free Protein Synthesis
Yoshihiro Sasaki, Wakiko Asayama, Tatsuya Niwa, Shin-ichi Sawada, Takuya Ueda, Hideki Taguchi, Kazunari Akiyoshi
MACROMOLECULAR BIOSCIENCE 11 ( 6 ) 814 - 820 2011.06 [Refereed]
Single molecule imaging of the trans-translation entry process via anchoring of the tagged ribosome
Zhan-Ping Zhou, Yoshihiro Shimizu, Hisashi Tadakuma, Hideki Taguchi, Koichi Ito, Takuya Ueda
JOURNAL OF BIOCHEMISTRY 149 ( 5 ) 609 - 618 2011.05 [Refereed]
Shinobu Chiba, Takashi Kanamori, Takuya Ueda, Yoshinori Akiyama, Kit Pogliano, Koreaki Ito
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 108 ( 15 ) 6073 - 6078 2011.04 [Refereed]
Tatsuya Yamamoto, Yoshihiro Shimizu, Takuya Ueda, Yoshitsugu Shiro, Makoto Suematsu
INTERNATIONAL JOURNAL OF MASS SPECTROMETRY 302 ( 1-3 ) 132 - 138 2011.04 [Refereed]
Protein Generation Using a Reconstituted System
Bei-Wen Ying, Takuya Ueda
Protein Engineering Handbook, Volume 1 & Volume 2 2 515 - 535 2011.03 [Refereed]
Artificial organelle for energy production in artificial cell.
Yutetsu Kuruma, Toshiharu Suzuki, Masasuke Yoshida, Takuya Ueda
Advances in Artificial Life: 20th Anniversary Edition - Back to the Origins of Alife, ECAL 2011, Paris, France, August 8-12, 2011 438 2011 [Refereed]
Kenta Akama, Brooke E. Christian, Christie N. Jones, Takuya Ueda, Nono Takeuchi, Linda L. Spremulli
BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR BASIS OF DISEASE 1802 ( 7-8 ) 692 - 698 2010.07 [Refereed]
A novel complete reconstitution system for membrane integration of the simplest membrane protein
Ken-ichi Nishiyama, Masahide Maeda, Masato Abe, Takashi Kanamori, Keiko Shimamoto, Shoichi Kusumoto, Takuya Ueda, Hajime Tokuda
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS 394 ( 3 ) 733 - 736 2010.04 [Refereed]
A Highly Controllable Reconstituted Cell-Free System -a Breakthrough in Protein Synthesis Research
Hiroyuki Ohashi, Takashi Kanamori, Yoshihiro Shimizu, Takuya Ueda
CURRENT PHARMACEUTICAL BIOTECHNOLOGY 11 ( 3 ) 267 - 271 2010.04 [Refereed]
Takuma Suematsu, Shin-ichi Yokobori, Hiroyuki Morita, Shigeo Yoshinari, Takuya Ueda, Kiyoshi Kita, Nono Takeuchi, Yoh-ichi Watanabe
MOLECULAR MICROBIOLOGY 75 ( 6 ) 1445 - 1454 2010.03 [Refereed]
Tatsuya Yamamoto, Yoshihiro Shimizu, Takuya Ueda, Yoshitsugu Shiro
JOURNAL OF BIOLOGICAL CHEMISTRY 285 ( 8 ) 5646 - 5652 2010.02 [Refereed]
Ribosome Display with the PURE Technology
Ueda Takuya, Kanamori Takashi, Ohashi Hiroyuki
Cell-Free Protein Production: Methods and Protocols 607 219 - 225 2010 [Refereed]
Production of Multi-Subunit Complexes on Liposome Through an E. coli Cell-Free Expression System
Kuruma Yutetsu, Suzuki Toshiharu, Ueda Takuya
Cell-Free Protein Production: Methods and Protocols 607 161 - 171 2010 [Refereed]
Takamitsu Yano, Masashi Tanaka, Noboru Fukuda, Takuya Ueda, Hiroki Nagase
INTERNATIONAL JOURNAL OF MOLECULAR MEDICINE 25 ( 1 ) 153 - 158 2010.01 [Refereed]
EF-G2mt is an exclusive recycling factor in mammalian mitochondrial protein syntheis
Nono Takeuchi, Takuya Ueda
Seikagaku 82 ( 9 ) 825 - 831 2010 [Refereed]
Ueda T
Origins of Life and Evolution of Biospheres 40 ( 4 ) 411 - 413 2010 [Refereed]
EF-G2mt is an exclusive recycling factor in mammalian mitochondrial protein syntheis
Nono Takeuchi, Takuya Ueda
Seikagaku 82 ( 9 ) 825 - 831 2010 [Refereed]
EF-G2mt Is an Exclusive Recycling Factor in Mammalian Mitochondrial Protein Synthesis
Masafumi Tsuboi, Hiroyuki Morita, Yusuke Nozaki, Kenta Akama, Takuya Ueda, Koichi Ito, Knud H. Nierhaus, Nono Takeuchi
MOLECULAR CELL 35 ( 4 ) 502 - 510 2009.08 [Refereed]
Real-Time Monitoring of Cell-Free Translation on a Quartz-Crystal Microbalance
Shuntaro Takahashi, Masaaki Iida, Hiroyuki Furusawa, Yoshihiro Shimizu, Takuya Ueda, Yoshio Okahata
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY 131 ( 26 ) 9326 - 9332 2009.07 [Refereed]
Twin-Arginine-Dependent Translocation of SufI in the Absence of Cytosolic Helper Proteins
Eva Holzapfel, Michael Moser, Emile Schiltz, Takuya Ueda, Jean-Michel Betton, Matthias Muller
BIOCHEMISTRY 48 ( 23 ) 5096 - 5105 2009.06 [Refereed]
Kensaku Mori, Kuniaki Fukuda, Hitoshi Asaoka, Takuya Ueda, Akira Kunimatsu, Yoshikazu Okamoto, Katsuhiro Nasu, Kiyoshi Fukunaga, Yukio Morishita, Manabu Minami
RADIOLOGY 251 ( 2 ) 557 - 565 2009.05 [Refereed]
Epitope Mapping Using Ribosome Display in a Reconstituted Cell-Free Protein Synthesis System
Eriko Osada, Yoshihiro Shimizu, Bintang K. Akbar, Takashi Kanamori, Takuya Ueda
JOURNAL OF BIOCHEMISTRY 145 ( 5 ) 693 - 700 2009.05 [Refereed]
Chie Takemoto, Linda L. Spremulli, Lisa A. Benkowski, Takuya Ueda, Takashi Yokogawa, Kimitsuna Watanabe
NUCLEIC ACIDS RESEARCH 37 ( 5 ) 1616 - 1627 2009.04 [Refereed]
Tatsuya Niwa, Bei-Wen Ying, Katsuyo Saito, WenZhen Jin, Shoji Takada, Takuya Ueda, Hideki Taguchi
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 106 ( 11 ) 4201 - 4206 2009.03 [Refereed]
Yutetsu Kuruma, Pasquale Stano, Takuya Ueda, Pier Luigi Luisi
BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES 1788 ( 2 ) 567 - 574 2009.02 [Refereed]
Yokoyama S, Endo Y, Ueda T, Tanokura M
Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme 54 ( 12 Suppl ) 1441 - 1442 2009 [Refereed]
[ PURE system: a reconstituted cell-free protein synthesis system].
Ueda T
Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme 54 ( 12 Suppl ) 1448 - 1451 2009 [Refereed]
Niwa T, Ueda T, Taguchi H
Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme 54 ( 14 ) 1870 - 1875 2009 [Refereed]
Jun-ichi Takeda, Yutaka Suzuki, Ryuichi Sakate, Yoshiharu Sato, Masahide Seki, Takuma Irie, Nono Takeuchi, Takuya Ueda, Mitsuteru Nakao, Sumio Sugano, Takashi Gojobori, Tadashi Imanishi
NUCLEIC ACIDS RESEARCH 36 ( 20 ) 6386 - 6395 2008.11 [Refereed]
Hitomi S. Kikkawa, Takuya Ueda, Shin-ichi Suzuki, Jiro Yasuda
FEMS MICROBIOLOGY LETTERS 286 ( 2 ) 236 - 240 2008.09 [Refereed]
Toshihiro Ishizawa, Yusuke Nozaki, Takuya Ueda, Nono Takeuchi
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS 373 ( 1 ) 99 - 103 2008.08 [Refereed]
The Constructive Approach for Cell-Free Translation
Takuya Ueda
Cell-Free Protein Synthesis: Methods and Protocols 35 - 50 2008.07 [Refereed]
Single-molecule imaging of full protein synthesis by immobilized ribosomes
Sotaro Uemura, Ryo Iizuka, Taro Ueno, Yoshihiro Shimizu, Hideki Taguchi, Takuya Ueda, Joseph D. Puglisi, Takashi Funatsu
NUCLEIC ACIDS RESEARCH 36 ( 12 ) 2008.07 [Refereed]
Riu Yamashita, Yutaka Suzuki, Nono Takeuchi, Hiroyuki Wakaguri, Takuya Ueda, Sumio Sugano, Kenta Nakai
NUCLEIC ACIDS RESEARCH 36 ( 11 ) 3707 - 3715 2008.06 [Refereed]
Yusuke Nozaki, Noriko Matsunaga, Toshihiro Ishizawa, Takuya Ueda, Nono Takeuchi
GENES TO CELLS 13 ( 5 ) 429 - 438 2008.05 [Refereed]
Polyadenylation in mammalian mitochondria: Insights from recent studies
Takashi Nagaike, Tsutomu Suzuki, Takuya Ueda
BIOCHIMICA ET BIOPHYSICA ACTA-GENE REGULATORY MECHANISMS 1779 ( 4 ) 266 - 269 2008.04 [Refereed]
70S ribosomes bind to Shine-Dalgarno sequences without required dissociations
Shuntaro Takahashi, Ryoko Akita, Hisao Matsuno, Hiroyuki Furusawa, Yoshihiro Shimizu, Takuya Ueda, Yoshio Okahata
CHEMBIOCHEM 9 ( 6 ) 870 - 873 2008.04 [Refereed]
UncI protein can mediate ring-assembly of c-subunits of FoF1-ATP synthase in vitro
Yoko Ozaki, Toshiharu Suzuki, Yutetsu Kuruma, Takuya Ueda, Masasuke Yoshida
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS 367 ( 3 ) 663 - 666 2008.03 [Refereed]
Elongation factor Tu mutants expand amino acid tolerance of protein biosynthesis system
Yoshio Doi, Takashi Ohtsuki, Yoshihiro Shimizu, Takuya Ueda, Masahiko Sisido
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY 129 ( 46 ) 14458 - 14462 2007.11 [Refereed]
Ribosomal protein S1 is not essential for the trans-translation machinery
Hao Qi, Yoshihiro Shimizu, Takuya Ueda
JOURNAL OF MOLECULAR BIOLOGY 368 ( 3 ) 845 - 852 2007.05 [Refereed]
Rippei Hayashi, Takuya Ueda, Mary A. Farwell, Nono Takeuchi
MITOCHONDRION 7 ( 3 ) 195 - 203 2007.05 [Refereed]
Chaperone properties of mammalian mitochondrial translation elongation factor Tu
Hiroaki Suzuki, Takuya Ueda, Hideki Taguchi, Nono Takeuchi
JOURNAL OF BIOLOGICAL CHEMISTRY 282 ( 6 ) 4076 - 4084 2007.02 [Refereed]
The PURE System: A Minimal Cell-Free Translation System
Ying B-W, Shimizu Y, Ueda T
Cell-Free ProteinExpression 76 - 83 2007 [Refereed]
Efficient protein selection based on ribosome display system with purified components
Hiroyuki Ohashi, Yoshihiro Shimizu, Bei-Wen Ying, Takuya Ueda
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS 352 ( 1 ) 270 - 276 2007.01 [Refereed]
Kinetic analysis of the effects of translation enhancers in translation initiation.
Takahashi S, Furusawa H, Shimizu Y, Ueda T, Okahata Y
Nucleic acids symposium series (2004) ( 51 ) 45 - 46 2007 [Refereed]
Kyoko Suto, Yoshihiro Shimizu, Kazunori Watanabe, Takuya Ueda, Shuya Fukai, Osamu Nureki, Kozo Tomita
EMBO JOURNAL 25 ( 24 ) 5942 - 5950 2006.12 [Refereed]
Cell-free translation systems for protein engineering
Yoshihiro Shimizu, Yutetsu Kuruma, Bei-Wen Ying, So Umekage, Takuya Ueda
FEBS JOURNAL 273 ( 18 ) 4133 - 4140 2006.09 [Refereed]
Bei-Wen Ying, Hideki Taguchi, Takuya Ueda
JOURNAL OF BIOLOGICAL CHEMISTRY 281 ( 31 ) 21813 - 21819 2006.08 [Refereed]
Y Shimizu, T Ueda
JOURNAL OF BIOLOGICAL CHEMISTRY 281 ( 23 ) 15987 - 15996 2006.06 [Refereed]
K Masuda, K Sakamoto, M Kojima, T Aburatani, T Ueda, H Ueda
FEBS JOURNAL 273 ( 10 ) 2184 - 2194 2006.05 [Refereed]
Spermidine inhibits transient and stable ribosome subunit dissociation
S Umekage, T Ueda
FEBS LETTERS 580 ( 5 ) 1222 - 1226 2006.02 [Refereed]
Kinetic analysis of ribosome binding process onto mRNA using a quartz-crystal microbalance
Takahashi S, Akita R, Furusawa H, Shimizu Y, Ueda T, Okahata Y
Nucleic acids symposium series ( 50 ) 49 - 50 2006 [Refereed]
Protein synthesis by pure translation systems
Y Shimizu, T Kanamori, T Ueda
METHODS 36 ( 3 ) 299 - 304 2005.07 [Refereed]
Y Kuruma, K Nishiyama, Y Shimizu, M Muller, T Ueda
BIOTECHNOLOGY PROGRESS 21 ( 4 ) 1243 - 1251 2005.07 [Refereed]
T Nagaike, T Suzuki, T Katoh, T Ueda
JOURNAL OF BIOLOGICAL CHEMISTRY 280 ( 20 ) 19721 - 19727 2005.05 [Refereed]
Esterification of Eschericia coli tRNAs with D-histidine and D-lysine by aminoacyl-tRNA synthetases
T Takayama, T Ogawa, M Hidaka, Y Shimizu, T Ueda, H Masaki
BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY 69 ( 5 ) 1040 - 1041 2005.05 [Refereed]
T Nagaike, T Suzuki, T Katoh, T Ueda
JOURNAL OF BIOLOGICAL CHEMISTRY 280 ( 20 ) 19721 - 19727 2005.05 [Refereed]
Co-translational involvement of the chaperonin GroEL in the folding of newly translated polypeptides
BW Ying, H Taguchi, M Kondo, T Ueda
JOURNAL OF BIOLOGICAL CHEMISTRY 280 ( 12 ) 12035 - 12040 2005.03 [Refereed]
Structural basis for template-independent RNA polymerization
K Tomita, S Fukai, R Ishitani, T Ueda, N Takeuchi, DG Vassylyev, O Nureki
NATURE 430 ( 7000 ) 700 - 704 2004.08 [Refereed]
Chaperone-assisted folding of a single-chain antibody in a reconstituted translation system
BW Ying, H Taguchi, H Ueda, T Ueda
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS 320 ( 4 ) 1359 - 1364 2004.08 [Refereed]
Recombinant antigen-based immuno-slot blot method for serodiagnosis of syphilis
NS Sato, T Suzuki, T Ueda, K Watanabe, RDC Hirata, MH Hirata
BRAZILIAN JOURNAL OF MEDICAL AND BIOLOGICAL RESEARCH 37 ( 7 ) 949 - 955 2004.07 [Refereed]
Hidefumi Kuwata, Sachiko Takami, Takashi Kanamori, Yoshihiro Shimizu, Go Hattori, Koji Sato, Yoshinori Saruta, Yukie Sameshima, Tomoko Miyagi, Bei-Wen Ying, Takuya Ueda
CELL STRUCTURE AND FUNCTION 29 93 - 93 2004.05 [Refereed]
N Hino, T Suzuki, T Yasukawa, K Seio, K Watanabe, T Ueda
GENES TO CELLS 9 ( 3 ) 243 - 252 2004.03 [Refereed]
T Udagawa, Y Shimizu, T Ueda
JOURNAL OF BIOLOGICAL CHEMISTRY 279 ( 10 ) 8539 - 8546 2004.03 [Refereed]
[Reconstitution of in vitro protein maturation system: the pure approach for protein maturation]
Ying B. W, Ueda T
Tanpakushitsu Kakusan Koso 49 ( 7 Suppl ) 834 - 7 2004 [Refereed]
Shimizu Y, Ueda T
Tanpakushitsu Kakusan Koso 49 ( 11 Suppl ) 1520 - 6 2004 [Refereed]
N Takeuchi, T Ueda
JOURNAL OF BIOLOGICAL CHEMISTRY 278 ( 46 ) 45318 - 45324 2003.11 [Refereed]
Decreased CCA-addition in human mitochondrial tRNAs bearing a pathogenic A4317G or A10044G mutation
Y Tomari, N Hino, T Nagaike, T Suzuki, T Ueda
JOURNAL OF BIOLOGICAL CHEMISTRY 278 ( 19 ) 16828 - 16833 2003.05 [Refereed]
T Nomura, R Mochizuki, ER Dabbs, Y Shimizu, T Ueda, A Hachimori, T Uchiumi
BIOCHEMISTRY 42 ( 16 ) 4691 - 4698 2003.04 [Refereed]
A novel screening system for self-mRNA targeting proteins
BW Ying, T Suzuki, Y Shimizu, T Ueda
JOURNAL OF BIOCHEMISTRY 133 ( 4 ) 485 - 491 2003.04 [Refereed]
K Tomita, S Yokobori, T Oshima, T Ueda, K Watanabe
JOURNAL OF MOLECULAR EVOLUTION 54 ( 4 ) 486 - 500 2002.04 [Refereed]
The role of SmpB protein in trans-translation
Y Shimizu, T Ueda
FEBS LETTERS 514 ( 1 ) 74 - 77 2002.03 [Refereed]
tRNA recognition by CCA-adding enzyme.
Tomari Y, Suzuki T, Ueda T
Nucleic acids research. Supplement (2001) ( 2 ) 77 - 78 2002 [Refereed]
Identification and characterization of mammalian mitochondrial tRNA nucleotidyltransferases
T Nagaike, T Suzuki, Y Tomari, C Takemoto-Hori, F Negayama, K Watanabe, T Ueda
JOURNAL OF BIOLOGICAL CHEMISTRY 276 ( 43 ) 40041 - 40049 2001.10 [Refereed]
T Suzuki, M Terasaki, C Takemoto-Hori, T Hanada, T Ueda, A Wada, K Watanabe
JOURNAL OF BIOLOGICAL CHEMISTRY 276 ( 35 ) 33181 - 33195 2001.08 [Refereed]
T Yasukawa, T Suzuki, N Ishii, T Ueda, S Ohta, K Watanabe
FEBS LETTERS 467 ( 2-3 ) 175 - 178 2000.02 [Refereed]
T Yasukawa, T Suzuki, N Ishii, T Ueda, S Ohta, K Watanabe
FEBS LETTERS 467 ( 2-3 ) 175 - 178 2000.02 [Refereed]
S Yokobori, T Ueda, G Feldmaier-Fuchs, S Paabo, R Ueshima, A Kondow, K Nishikawa, K Watanabe
GENETICS 153 ( 4 ) 1851 - 1862 1999.12 [Refereed]
S Yokobori, T Ueda, G Feldmaier-Fuchs, S Paabo, R Ueshima, A Kondow, K Nishikawa, K Watanabe
GENETICS 153 ( 4 ) 1851 - 1862 1999.12 [Refereed]
Peptide bond formation: Retraction
Nitta, I, Y Kamada, H Noda, T Ueda, K Watanabe
SCIENCE 283 ( 5410 ) 2019 - 2020 1999.03 [Refereed]
Takemoto C, Ueda T, Miura K, Watanabe K
Nucleic acids symposium series ( 42 ) 77 - 78 1999 [Refereed]
I. Nitta, T. Ueda, K. Watanabe
RNA 5 ( 5 ) 707 1999 [Refereed]
K Tomita, T Ueda, K Watanabe
BIOCHIMICA ET BIOPHYSICA ACTA-GENE STRUCTURE AND EXPRESSION 1399 ( 1 ) 78 - 82 1998.07 [Refereed]
K Tomita, T Ueda, K Watanabe
BIOCHIMICA ET BIOPHYSICA ACTA-GENE STRUCTURE AND EXPRESSION 1399 ( 1 ) 78 - 82 1998.07 [Refereed]
Ascidian mitochondrial tRNA(Met) possessing unique structural characteristics
A Kondow, S Yokobori, T Ueda, K Watanabe
NUCLEOSIDES & NUCLEOTIDES 17 ( 1-3 ) 531 - 539 1998.01 [Refereed]
MAS Santos, T Ueda, K Watanabe, MF Tuite
MOLECULAR MICROBIOLOGY 26 ( 3 ) 423 - 431 1997.11 [Refereed]
Y Watanabe, K Kita, T Ueda, K Watanabe
BIOCHIMICA ET BIOPHYSICA ACTA-GENE STRUCTURE AND EXPRESSION 1353 ( 1 ) 7 - 12 1997.07 [Refereed]
Y Watanabe, K Kita, T Ueda, K Watanabe
BIOCHIMICA ET BIOPHYSICA ACTA-GENE STRUCTURE AND EXPRESSION 1353 ( 1 ) 7 - 12 1997.07 [Refereed]
Hayashi, I, T Yokogawa, G Kawai, T Ueda, K Nishikawa, K Watanabe
JOURNAL OF BIOCHEMISTRY 121 ( 6 ) 1115 - 1122 1997.06 [Refereed]
Hayashi, I, T Yokogawa, G Kawai, T Ueda, K Nishikawa, K Watanabe
JOURNAL OF BIOCHEMISTRY 121 ( 6 ) 1115 - 1122 1997.06 [Refereed]
Y Watanabe, H Tsurui, T Ueda, R FurusihimaShimogawara, S Takamiya, K Kita, K Nishikawa, K Watanabe
BIOCHIMICA ET BIOPHYSICA ACTA-GENE STRUCTURE AND EXPRESSION 1350 ( 2 ) 119 - 122 1997.02 [Refereed]
Y Watanabe, H Tsurui, T Ueda, R FurusihimaShimogawara, S Takamiya, K Kita, K Nishikawa, K Watanabe
BIOCHIMICA ET BIOPHYSICA ACTA-GENE STRUCTURE AND EXPRESSION 1350 ( 2 ) 119 - 122 1997.02 [Refereed]
Mitochondrial methionyl-tRNA transformylase from bovine liver
Takeuchi N, Kawakami M, Ueda T, Spremulli L. L, Watanabe K
Nucleic Acids Symp Ser ( 37 ) 195 - 6 1997 [Refereed]
Hori H, Yamazaki N, Matsumoto T, Ueda T, Nishikawa K, Kumagai I, Watanabe K
Nucleic Acids Symp Ser ( 37 ) 189 - 90 1997 [Refereed]
Colicin E5 as a new type of cytotoxin, which cleaves a specific group of tRNAs
Masaki H, Ogawa T, Tomita K, Ueda T, Watanabe K, Uozumi T
Nucleic Acids Symp Ser ( 37 ) 287 - 8 1997 [Refereed]
Tomita K, Ueda T, Watanabe K
Nucleic Acids Symp Ser ( 37 ) 197 - 8 1997 [Refereed]
Polysemous codon found in Candida species
Ueda T, Suzuki T, Watanabe K
Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme 42 ( 11 ) 1815 - 1827 1997 [Refereed]
T Nojima, Nitta, I, T Ueda, K Watanabe
JOURNAL OF BIOCHEMISTRY 119 ( 6 ) 1076 - 1079 1996.06 [Refereed]
A new method for identifying the amino acid attached to a particular RNA in the cell
T Suzuki, T Ueda, K Watanabe
FEBS LETTERS 381 ( 3 ) 195 - 198 1996.03 [Refereed]
A new method for identifying the amino acid attached to a particular RNA in the cell
T Suzuki, T Ueda, K Watanabe
FEBS LETTERS 381 ( 3 ) 195 - 198 1996.03 [Refereed]
Two nucleotides 5'-adjacent to the anticodon of rat cytoplasmic tRNA(Asp) are not edited
K Tomita, T Ueda, K Watanabe
BIOCHIMIE 78 ( 11-12 ) 1001 - 1006 1996 [Refereed]
C Ushida, T Muramatsu, H Mizushima, T Ueda, K Watanabe, KO Stetter, PF Crain, JA McCloskey, Y Kuchino
BIOCHIMIE 78 ( 10 ) 847 - 855 1996 [Refereed]
Two nucleotides 5'-adjacent to the anticodon of rat cytoplasmic tRNA(Asp) are not edited
K Tomita, T Ueda, K Watanabe
BIOCHIMIE 78 ( 11-12 ) 1001 - 1006 1996 [Refereed]
C Ushida, T Muramatsu, H Mizushima, T Ueda, K Watanabe, KO Stetter, PF Crain, JA McCloskey, Y Kuchino
BIOCHIMIE 78 ( 10 ) 847 - 855 1996 [Refereed]
Interaction of mitochondrial elongation factors Tu.Ts with aminoacyl-tRNA
Benkowski L. A, Takemoto C, Ott G, Beikman M, Ueda T, Watanabe K, Sprinzl M, Spremulli L. L
Nucleic Acids Symp Ser ( 33 ) 163 - 6 1995 [Refereed]
Template-dependent Polymerization of Amino Acids by Utilizing Protein Synthesis Systems
Nitta I, Ueda T, Watanabe K
Kobunshi 44 ( 9 ) 604 - 607 1995 [Refereed]
Modified nucleosides of tRNA in decoding
Ueda T, Watanabe K
Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme 40 ( 10 ) 1465 - 1473 1995 [Refereed]
S NAKANISHI, T UEDA, H HORI, N YAMAZAKI, N OKADA, K WATANABE
JOURNAL OF BIOLOGICAL CHEMISTRY 269 ( 51 ) 32221 - 32225 1994.12 [Refereed]
S NAKANISHI, T UEDA, H HORI, N YAMAZAKI, N OKADA, K WATANABE
JOURNAL OF BIOLOGICAL CHEMISTRY 269 ( 51 ) 32221 - 32225 1994.12 [Refereed]
Catalytic role of base nucleotides in peptide bond formation on ribosomes: implication of the origin of protein synthesis
Takuya Ueda, Itaru Nitta, Takahiko Nojima, Kimitsuna Watanabe
Nucleic Acids Symposium Series 31 267 - 268 1994.11
Origin and evolution of genetic code: an idea on the mechanism of emergence of unusual genetic codes
T. Ueda, S. Yokobori, K. Watanabe
Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme 39 ( 15 ) 2427 - 2437 1994.11 [Refereed]
YI WATANABE, H TSURUI, T UEDA, R FURUSHIMA, S TAKAMIYA, K KITA, K NISHIKAWA, K WATANABE
JOURNAL OF BIOLOGICAL CHEMISTRY 269 ( 36 ) 22902 - 22906 1994.09 [Refereed]
YI WATANABE, H TSURUI, T UEDA, R FURUSHIMA, S TAKAMIYA, K KITA, K NISHIKAWA, K WATANABE
JOURNAL OF BIOLOGICAL CHEMISTRY 269 ( 36 ) 22902 - 22906 1994.09 [Refereed]
SUBSTRATE-SPECIFICITY OF TRANSFER-RNA (ADENINE-1-)-METHYLTRANSFERASE FROM THERMUS-THERMOPHILUS HB27
N YAMAZAKI, H HORI, K OZAWA, S NAKANISHI, T UEDA, KUMAGAI, I, K WATANABE, K NISHIKAWA
BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY 58 ( 6 ) 1128 - 1133 1994.06 [Refereed]
SUBSTRATE-SPECIFICITY OF TRANSFER-RNA (ADENINE-1-)-METHYLTRANSFERASE FROM THERMUS-THERMOPHILUS HB27
N YAMAZAKI, H HORI, K OZAWA, S NAKANISHI, T UEDA, KUMAGAI, I, K WATANABE, K NISHIKAWA
BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY 58 ( 6 ) 1128 - 1133 1994.06 [Refereed]
H TOHDA, N CHIKAZUMI, T UEDA, K NISHIKAWA, K WATANABE
JOURNAL OF BIOTECHNOLOGY 34 ( 1 ) 61 - 69 1994.04 [Refereed]
H TOHDA, N CHIKAZUMI, T UEDA, K NISHIKAWA, K WATANABE
JOURNAL OF BIOTECHNOLOGY 34 ( 1 ) 61 - 69 1994.04 [Refereed]
Translational system in animal mitochondria
Ueda Takuya, Watanabe Kimitsuna
Cell Structure and Function 19 ( 6 ) 428 1994 [Refereed]
EXISTENCE OF NUCLEAR-ENCODED 5S-RIBOSOMAL-RNA IN BOVINE MITOCHONDRIA
S YOSHIONARI, T KOIKE, T YOKOGAWA, K NISHIKAWA, T UEDA, K MIURA, K WATANABE
FEBS LETTERS 338 ( 2 ) 137 - 142 1994.01 [Refereed]
EXISTENCE OF NUCLEAR-ENCODED 5S-RIBOSOMAL-RNA IN BOVINE MITOCHONDRIA
S YOSHIONARI, T KOIKE, T YOKOGAWA, K NISHIKAWA, T UEDA, K MIURA, K WATANABE
FEBS LETTERS 338 ( 2 ) 137 - 142 1994.01 [Refereed]
T UEDA, K WATANABE
ORIGINS OF LIFE AND EVOLUTION OF BIOSPHERES 23 ( 5-6 ) 345 - 364 1993.12 [Refereed]
T UEDA, K WATANABE
ORIGINS OF LIFE AND EVOLUTION OF BIOSPHERES 23 ( 5-6 ) 345 - 364 1993.12 [Refereed]
T UZAWA, A YAMAGISHI, T UEDA, N CHIKAZUMI, K WATANABE, T OSHIMA
JOURNAL OF BIOCHEMISTRY 114 ( 5 ) 732 - 734 1993.11 [Refereed]
MOLECULAR MECHANISM OF THE GENETIC-CODE VARIATIONS FOUND IN CANDIDA SPECIES AND ITS IMPLICATIONS IN EVOLUTION OF THE GENETIC-CODE
K WATANABE, T UEDA, T YOKOGAWA, T SUZUKI, K NISHIKAWA, M MORI, T OHAMA, H NAKABAYASHI, T NAKASE, S OSAWA
TRANSLATIONAL APPARATUS 647 - 656 1993 [Refereed]
Tertiary structures of mitochondrial tRNAs having characteristic secondary structures
Watanabe Y, Kawai G, Yokogawa T, Hayashi I, Hayashi N, Nishikawa K, Ueda T, Watanabe K
Nucleic Acids Symp Ser ( 29 ) 209 - 10 1993 [Refereed]
T SUZUKI, T UEDA, T OHAMA, S OSAWA, K WATANABE
NUCLEIC ACIDS RESEARCH 21 ( 2 ) 356 - 356 1993.01 [Refereed]
CODONS AGA AND AGG ARE READ AS GLYCINE IN ASCIDIAN MITOCHONDRIA
S YOKOBORI, T UEDA, K WATANABE
JOURNAL OF MOLECULAR EVOLUTION 36 ( 1 ) 1 - 8 1993.01 [Refereed]
Tertiary structural analysis of Escherichia coli lysine tRNA.
Hayashi N, Kawai G, Takayanagi M, Noguchi T, Ueda T, Nishikawa K, Miura K, Miyazawa T, Yokoyama S, Watanabe K
Nucleic acids symposium series ( 29 ) 195 - 196 1993 [Refereed]
Non-universal genetic codes and their evolutionary processes
Ueda T, Watanabe K
Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme 38 ( 16 ) 2677 - 2691 1993 [Refereed]
CODONS AGA AND AGG ARE READ AS GLYCINE IN ASCIDIAN MITOCHONDRIA
S YOKOBORI, T UEDA, K WATANABE
JOURNAL OF MOLECULAR EVOLUTION 36 ( 1 ) 1 - 8 1993.01 [Refereed]
Yamazaki N, Hori H, Ozawa K, Nakanishi S, Ueda T, Kumagai I, Watanabe K, Nishikawa K
Nucleic Acids Symp Ser ( 27 ) 141 - 2 1992 [Refereed]
Structure of mitochondrial tRNA
Yokogawa T, Watanabe Y, Yotsumoto Y, Kumazawa Y, Ueda T, Hirao I, Miura K, Watanabe K
Nucleic Acids Symp Ser ( 25 ) 175 - 6 1991 [Refereed]
Cell-free translation system using phosphorothioate-containing mRNA
Ueda T, Tohda H, Chikazumi N, Eckstein F, Watanabe K
Nucleic Acids Symp Ser ( 25 ) 151 - 2 1991 [Refereed]
THE GENETIC-CODE OF A SQUID MITOCHONDRIAL GENE
T SHIMAYAMA, H HIMENO, J SASUGA, T UEDA, K WATANABE
SYMPOSIUM ON NUCLEIC ACIDS TECHNOLOGY 22 ( 22 ) 73 - 74 1990 [Refereed]
DISCRIMINATOR BASE AND ANTICODON AS A TRANSFER-RNA IDENTITY ELEMENT
H HIMENO, H ASAHARA, K TAMURA, T HASEGAWA, T UEDA, K WATANABE, M SHIMIZU
SYMPOSIUM ON NUCLEIC ACIDS TECHNOLOGY 22 ( 22 ) 117 - 118 1990 [Refereed]
T UEDA, K WATANABE
SIXTEENTH SYMPOSIUM ON NUCLEIC ACIDS CHEMISTRY 21 ( 21 ) 113 - 114 1989 [Refereed]
A novel lysine-substituted nucleoside in the first position of the anticodon of minor isoleucine tRNA from Escherichia coli
T. Muramatsu, S. Yokoyama, N. Horie, A. Matsuda, T. Ueda, Z. Yamaizumi, Y. Kuchino, S. Nishimura, T. Miyazawa
Journal of Biological Chemistry 263 ( 19 ) 9261 - 9267 1988 [Refereed]
T UEDA, T OHTA, K WATANABE
JOURNAL OF BIOCHEMISTRY 98 ( 5 ) 1275 - 1284 1985 [Refereed]
Structural analysis of bovine mitochondrial tRNASer (AGY)
Ueda T, Watanabe K, Ohta T
Nucleic Acids Symp Ser ( 12 ) 141 - 4 1983 [Refereed]
Primary sequence of ascidian mitochondrial glycine tRNA translating non-universal codons AGR (R: A, G)
Akiko Kondo, Shin-ichi Yokobori, Takuya Ueda, Kimitsuna Watanabe
Nucleic Acids Symp. Ser. 35 279 - 280 [Refereed]
Molecular mechanism of the genetic code variations found in Candida species and its implications in evolution of the genetic code
The translational apparatns Structure, Function, Regulation, Evolution 1993
タンパク質膜挿入反応に関与する糖脂質酵素MPlaseは生育に必須である
沢里 克宏, 佐藤 諒, 西川 華子, 飯村 直樹, 藤川 紘樹, 山口 敏幸, 車 ゆうてつ, 田村 康, 遠藤 斗志也, 上田 卓也, 島本 啓子, 西山 賢一
生命科学系学会合同年次大会 2017年度 [4AT26 - 09(3P 2017.12
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日本蛋白質科学会年会プログラム・要旨集 16th 28 2016.05
リボソーム再生過程に特化したバクテリアのEF-Gホモログ
末松卓真, 横堀伸一, 森田寛幸, 吉成茂夫, 上田卓也, 北潔, 竹内野乃, 渡邊洋一
日本RNA学会年会要旨集 12th 2010
水晶発振子と無細胞翻訳系を組み合わせて可能にしたタンパク質生合成のその場観察
高橋俊太郎, 古澤宏幸, 清水義宏, 上田卓也, 岡畑恵雄
日本化学会バイオテクノロジー部会シンポジウム講演要旨集 12th 50 2009.09
水晶発振子と無細胞合成系を組み合わせた翻訳反応のリアルタイム解析
黒田大介, 高橋俊太郎, 古澤宏幸, 清水義宏, 上田卓也, 岡畑恵雄
日本RNA学会年会要旨集 11th 121 2009.07
水晶発振子上で観察した翻訳開始複合体からの翻訳開始因子の解離過程
高橋俊太郎, 古澤宏幸, 清水義宏, 上田卓也, 岡畑恵雄
日本RNA学会年会要旨集 11th 90 2009.07
Evaluation of protein expression depending on the sequence of mRNA based on real‐time monitoring of protein synthesis
高橋俊太郎, 古澤宏幸, 清水義宏, 上田卓也, 岡畑恵雄
日本化学会講演予稿集 89th ( 2 ) 1425 2009.03
Observations of translation elongation processes from translation initiation complex immobilized on Quartz‐crystal Microbalance
本田智子, 高橋俊太郎, 古澤宏幸, 清水義宏, 上田卓也, 岡畑恵雄
日本化学会講演予稿集 89th ( 2 ) 1311 2009.03
リボソーム再生過程に特化したバクテリアのEF-Gホモログの発見
末松卓真, 横堀伸一, 森田寛幸, 吉成茂夫, 上田卓也, 北潔, 竹内野乃, 渡邊洋一
日本分子生物学会年会講演要旨集 32nd ( Vol.3 ) 2009
γ phage由来lysin PlyGBのBacillus anthracis特異的結合に関する解析
吉川ひとみ, 藤波良仁, 中村周吾, 鈴木真一, 安田二朗, 上田卓也
日本分子生物学会年会講演要旨集 32nd ( Vol.4 ) 79 2009
水晶発振子上での無細胞翻訳系タンパク質合成のその場観察
飯田匡章, 高橋俊太郎, 古澤宏幸, 清水義宏, 上田卓也, 岡畑恵雄
日本化学会バイオテクノロジー部会シンポジウム講演要旨集 11th 197 2008.09
水晶発振子を用いた翻訳伸長過程の相互作用解析
本田智子, 高橋俊太郎, 吉嶺浩司, 古澤宏幸, 清水義宏, 上田卓也, 岡畑恵雄
日本化学会バイオテクノロジー部会シンポジウム講演要旨集 11th 199 2008.09
水晶発振子法を用いたリボソームディスプレイのモニタリング
飯田匡章, 高橋俊太郎, 古澤宏幸, 清水義宏, 上田卓也, 岡畑恵雄
日本化学会講演予稿集 88th ( 2 ) 881 2008.03
翻訳開始因子固定化水晶発振子上での開始複合体形成過程の観察
磯部英美, 高橋俊太郎, 古澤宏幸, 清水義宏, 上田卓也, 岡畑恵雄
日本化学会講演予稿集 88th ( 2 ) 881 2008.03
水晶発振子上でのmRNAに対するリボソームの結合動力学と翻訳効率の相関性
高橋俊太郎, 古澤宏幸, 清水義宏, 上田卓也, 岡畑恵雄
生体機能関連化学シンポジウム講演要旨集 22nd 204 - 205 2007.09
水晶発振子基板上でのリボソーム翻訳開始複合体形成過程の反応解析
磯部英美, 高橋俊太郎, 古澤宏幸, 清水義宏, 上田卓也, 岡畑恵雄
生体機能関連化学シンポジウム講演要旨集 22nd 426 - 427 2007.09
翻訳開始時におけるmRNA上のリボソームの動きやすさの動力学的評価
高橋俊太郎, 古澤宏幸, 清水義宏, 上田卓也, 岡畑恵雄
日本RNA学会年会要旨集 9th 88 2007.07
翻訳開始因子を固定化した水晶発振子上での開始複合体形成過程の観察
磯部英美, 高橋俊太郎, 古澤宏幸, 清水義宏, 上田卓也, 岡畑恵雄
日本RNA学会年会要旨集 9th 150 2007.07
タンパク質合成開始時におけるmRNA上でのリボソームの動きやすさの動力学解析
高橋俊太郎, 古澤宏幸, 清水義宏, 上田卓也, 岡畑恵雄
日本化学会講演予稿集 87th ( 2 ) 1304 2007.03
翻訳伸長段階におけるリボソームおよびtRNAのダイナミクスと分子擬態
清水義宏, 上田卓也
実験医学 25 5 - 12 2007
柔軟な翻訳開始システムの動力学的アプローチ
高橋俊太郎, 秋田涼子, 古澤宏幸, 清水義宏, 上田卓也, 岡畑恵雄
日本化学会バイオテクノロジー部会シンポジウム講演要旨集 9th 210 2006.09
Analysis of the Translation Process in E.coli Using Quartz‐crystal Microbalance: observation of the translation elongation process
秋田涼子, 高橋俊太郎, 古澤宏幸, 清水義宏, 上田卓也, 岡畑恵雄
日本化学会講演予稿集 86th ( 2 ) 843 2006.03
Analysis of the Translation Process in E.coli Using Quartz‐crystal Microbalance: the Binding Properties of Ribosome to mRNAs
高橋俊太郎, 秋田涼子, 古澤宏幸, 清水義宏, 上田卓也, 岡畑恵雄
日本化学会講演予稿集 86th ( 2 ) 843 2006.03
Interaction analysis for a chaperone and a signal recognition particle binding onto a ribosome by using quartz-crystal microbalance (QCM)
FURUSAWA Hiroyuki, FURUSAWA Yuki, MITOMO Hideyuki, SHIGEMATSU Hideki, UEDA Takuya, OKAHATA Yoshio
生化学 77 ( 8 ) 1023 2005.08
無細胞蛋白質合成系: 大腸菌由来完全再構成系PURESYSTEM
清水義宏, 上田卓也
蛋白質核酸酵素 49 1520 - 1526 2004
ピュアなタンパク質をつくるためのPUREシステム
Bioベンチャー(羊土社) Vol.2 №1(1・2月号) 2002
無細胞タンパク質合成システム
実験医学(羊土社) Vol.20 №14(増刊号) 2002
無細胞タンパク質合成系の新展開
清水義宏, 上田卓也
遺伝子医学 6 266 - 270 2002
Structural compensation for the deficit of rRNA with proteins in the mammalian mitochondrial ribosome - Systematic analysis of protein components of the large ribosomal subunit from mammalian mitochondria
T Suzuki, M Terasaki, C Takemoto-Hori, T Hanada, T Ueda, A Wada, K Watanabe
JOURNAL OF BIOLOGICAL CHEMISTRY 276 ( 24 ) 21724 - 21736 2001.06
Modification defect at anticodon wobble nucleotide of mitochondrial tRNAs(Leu)(UUR) with pathogenic mutations of mitochondrial myopathy, encephalopathy, lactic acidosis, and stroke-like episodes
T Yasukawa, T Suzuki, T Suzuki, T Ueda, S Ohta, K Watanabe
JOURNAL OF BIOLOGICAL CHEMISTRY 275 ( 6 ) 4251 - 4257 2000.02
Complete DNA sequence of the mitochondrial genome of the ascidian Halocynthia roretxi (Chordata, Urochordata)
S Yokobori, T Ueda, G Feldmaier-Fuchs, S Paabo, R Ueshima, A Kondow, K Nishikawa, K Watanabe
GENETICS 153 ( 4 ) 1851 - 1862 1999.12
Possible involvement of Escherichia coli 23S ribosomal RNA in peptide bond formation (vol 4, pg 257, 1998)
Nitta, I, T Ueda, K Watanabe
RNA-A PUBLICATION OF THE RNA SOCIETY 5 ( 5 ) 707 - 707 1999.05
Other
High sensitive analysis of modified nucleosides by LC/MS using ESI/Iontrap mass spectrometry.
Tsutomu SUZUKI, Takeo SUZUKI, Takuya UEDA, Kimitsuna WATANABE
J. Mass Spectrom. Soc. Jpn. 47 ( 3 ) 168 - 176 1999
Expression and characterization of bovine mitochondrial methionyl-tRNA transformylase
N Takeuchi, T Ueda, K Watanabe
JOURNAL OF BIOCHEMISTRY 124 ( 6 ) 1069 - 1071 1998.12
Mammalian mitochondrial methionyl-tRNA transformylase from bovine liver - Purification, characterization, and gene structure
N Takeuchi, M Kawakami, A Omori, T Ueda, LL Spremulli, K Watanabe
JOURNAL OF BIOLOGICAL CHEMISTRY 273 ( 24 ) 15085 - 15090 1998.06
Possible involvement of Escherichia coli 23S ribosomal RNA in peptide bond formation
Nitta, I, T Ueda, K Watanabe
RNA-A PUBLICATION OF THE RNA SOCIETY 4 ( 3 ) 257 - 267 1998.03
Stability of mitochondrial tRNA molecules with pathogenic point mutations.
Nucleic Acids. Symp. Ser. 39 257 - 258 1998
7-Methylguanosine at the anticodon wobble position of squid mitochondrial tRNA serGCU : molecular basis for assigment of AGA/AGG codons as serine in invertebrate mitochopndria.
Biochim. Biophys. Acta 1399 78 - 82 1998
Ascidian mitochondrial tRNA(Met) possessing unique structural characteristics
A Kondow, S Yokobori, T Ueda, K Watanabe
NUCLEOSIDES & NUCLEOTIDES 17 ( 1-3 ) 531 - 539 1998.01
Assignment of imino proton signals of G-C base pairs and magnesium ion binding: An NMR study of bovine mitochondrial tRNA(GCU)(Ser) lacking the entire D arm
Hayashi, I, T Yokogawa, G Kawai, T Ueda, K Nishikawa, K Watanabe
JOURNAL OF BIOCHEMISTRY 121 ( 6 ) 1115 - 1122 1997.06
Evolution of pulmonate gastropod mitochondrial genomes: Comparisons of gene organizations of Euhadra, Cepaea and Albinaria and implications of unusual tRNA secondary structures
N Yamazaki, R Ueshima, JA Terrett, S Yokobori, M Kaifu, R Segawa, T Kobayashi, K Numachi, T Ueda, K Nishikawa, K Watanabe, RH Thomas
GENETICS 145 ( 3 ) 749 - 758 1997.03
Primary sequence of mitochondrial tRNA(Arg) of a nematode Ascaris suum: Occurrence of unmodified adenosine at the first position of the anticodon
Y Watanabe, H Tsurui, T Ueda, R FurusihimaShimogawara, S Takamiya, K Kita, K Nishikawa, K Watanabe
BIOCHIMICA ET BIOPHYSICA ACTA-GENE STRUCTURE AND EXPRESSION 1350 ( 2 ) 119 - 122 1997.02
"cDNA sequence of a translational elongation factor Ts homologue from Caenorhabditis elegans : mitochondrial factor-specific features found in the nematode homologue peptides.
Biochim. Biophys. Acta 1353 7 - 12 1997
Two nucleotides 5'-adijacent to the anticodon of rat cytoplasmic tRNA Asp are not edited ?
Biochimie 78 1001 - 1006 1997
Pyridine-promoted factor- and energy-free peptide synthesis systems prepared from various organisms including prokaryote, eukaryote, and mitochondria
T Nojima, Nitta, I, T Ueda, K Watanabe
JOURNAL OF BIOCHEMISTRY 119 ( 6 ) 1076 - 1079 1996.06
Various factor- and energy-free translation systems with pyridine.
野島高彦, 新田至, 竹本千重, 上田卓也, 渡辺公綱
日本分子生物学会年会プログラム・講演要旨集 18th 198 1995.11
FACTOR-FREE AND ENERGY-FREE PEPTIDE-SYNTHESIS PROMOTED BY AROMATIC TERTIARY-AMINES INCLUDING NUCLEIC ACID-RELATED COMPOUNDS
NITTA, I, T UEDA, K WATANABE
JOURNAL OF BIOCHEMISTRY 118 ( 4 ) 850 - 854 1995.10
TEMPLATE-DEPENDENT POLYPEPTIDE-SYNTHESIS IN A FACTOR-FREE AND ENERGY-FREE TRANSLATION SYSTEM PROMOTED BY PYRIDINE
NITTA, I, T UEDA, T NOJIMA, K WATANABE
JOURNAL OF BIOCHEMISTRY 118 ( 4 ) 841 - 849 1995.10
A novel foctor - and energy-free translation system promoted by tertiary amines and its implications toward the origin of translation system
Viva Origino 23 209 1995
THE ABILITY OF BOVINE MITOCHONDRIAL TRANSFER RNA(MET) TO DECODE AUG AND AUA CODONS
C TAKEMOTO, T KOIKE, T YOKOGAWA, L BENKOWSKI, LL SPREMULLI, TA UEDA, K NISHIKAWA, K WATANABE
BIOCHIMIE 77 ( 1-2 ) 104 - 108 1995
A UGU SEQUENCE IN THE ANTICODON LOOP IS A MINIMUM REQUIREMENT FOR RECOGNITION BY ESCHERICHIA-COLI TRANSFER-RNA-GUANINE TRANSGLYCOSYLASE
S NAKANISHI, T UEDA, H HORI, N YAMAZAKI, N OKADA, K WATANABE
JOURNAL OF BIOLOGICAL CHEMISTRY 269 ( 51 ) 32221 - 32225 1994.12
Decoding propaties of mitochondria tRNAs in D. melanogaster.
富田耕造, 上田卓也, 横堀伸一, 石和貞男, 渡辺公綱
日本分子生物学会年会プログラム・講演要旨集 17th 286 1994.11
Novel codon-anticodon relationships found in echinoderm mitochondria.
荒木武義, 大久保頼聡, 横堀伸一, 渡辺洋一, 上田卓也, 西川一八, 三浦謹一郎, 渡辺公綱
日本分子生物学会年会プログラム・講演要旨集 17th 286 1994.11
Animal mitochondrial tRNAs corresponding to codons AGN.
近藤晶子, 竹本千重, 横堀伸一, 横川隆志, 上田卓也, 渡辺公綱
日本分子生物学会年会プログラム・講演要旨集 17th 286 1994.11
PRIMARY-ORDER AND HIGHER-ORDER STRUCTURES OF NEMATODE (ASCARIS-SUUM) MITOCHONDRIAL TRANSFER-RNAS LACKING EITHER THE T-STEM OR D-STEM
YI WATANABE, H TSURUI, T UEDA, R FURUSHIMA, S TAKAMIYA, K KITA, K NISHIKAWA, K WATANABE
JOURNAL OF BIOLOGICAL CHEMISTRY 269 ( 36 ) 22902 - 22906 1994.09
RELATIONSHIP AMONG COELACANTHS, LUNGFISHES, AND TETRAPODS - A PHYLOGENETIC ANALYSIS BASED ON MITOCHONDRIAL CYTOCHROME-OXIDASE-I GENE-SEQUENCES
S YOKOBORI, M HASEGAWA, T UEDA, N OKADA, K NISHIKAWA, K WATANABE
JOURNAL OF MOLECULAR EVOLUTION 38 ( 6 ) 602 - 609 1994.06
EFFICIENT EXPRESSION OF ESCHERICHIA-COLI DIHYDROFOLATE-REDUCTASE GENE BY AN IN-VITRO TRANSLATION SYSTEM USING PHOSPHOROTHIOATE MESSENGER-RNA
H TOHDA, N CHIKAZUMI, T UEDA, K NISHIKAWA, K WATANABE
JOURNAL OF BIOTECHNOLOGY 34 ( 1 ) 61 - 69 1994.04
TEMPLATE-DEPENDENT PEPTIDE FORMATION ON RIBOSOMES CATALYZED BY PYRIDINE
NITTA, I, T UEDA, K WATANABE
JOURNAL OF BIOCHEMISTRY 115 ( 4 ) 803 - 807 1994.04
A NOVEL MODIFIED NUCLEOSIDE FOUND AT THE FIRST POSITION OF THE ANTICODON OF METHIONINE TRANSFER-RNA FROM BOVINE LIVER-MITOCHONDRIA
J MORIYA, T YOKOGAWA, K WAKITA, T UEDA, K NISHIKAWA, PF CRAIN, T HASHIZUME, SC POMERANTZ, JA MCCLOSKEY, G KAWAI, N HAYASHI, S YOKOYAMA, K WATANABE
BIOCHEMISTRY 33 ( 8 ) 2234 - 2239 1994.03
HIGHER-ORDER STRUCTURE OF BOVINE MITOCHONDRIAL TRNA(PHE) LACKING THE CONSERVED GG AND T-PSI-CG SEQUENCES AS INFERRED BY ENZYMATIC AND CHEMICAL PROBING
K WAKITA, Y WATANABE, T YOKOGAWA, Y KUMAZAWA, S NAKAMURA, T UEDA, K WATANABE, K NISHIKAWA
NUCLEIC ACIDS RESEARCH 22 ( 3 ) 347 - 353 1994.02
Characterization of serine and leucine tRNAs in an asporogenic yeast Candida cylindraceaand evolutionary implications of genes for tRNASerCAG responsible for translation of a non-universal genetic code
Tsutomu Suzuki, Takuya Ueda, Takashi Yokogawa, Kazuya Nishikawa, Kimitsuna Watanabe
Nucleic Acids Research 22 ( 2 ) 115 - 123 1994.01
CONFORMATIONAL PROPERTIES OF A NOVEL MODIFIED NUCLEOSIDE, 5-FORMYLCYTIDINE, FOUND AT THE FIRST POSITION OF THE ANTICODON OF BOVINE MITOCHONDRIAL TRNA(MET)
G KAWAI, T YOKOGAWA, K NISHIKAWA, T UEDA, T HASHIZUME, JA MCCLOSKEY, S YOKOYAMA, K WATANABE
NUCLEOSIDES & NUCLEOTIDES 13 ( 5 ) 1189 - 1199 1994
Origin and evolution of genetic code.Consideration on genration mechanism of irregular cryptogram.
上田卓也, 横堀伸一, 渡辺公綱
蛋白質 核酸 酵素 39 ( 15 ) 1994
NONUNIVERSAL DECODING OF THE LEUCINE CODON CUG IN SEVERAL CANDIDA SPECIES
T OHAMA, T SUZUKI, M MORI, S OSAWA, T UEDA, K WATANABE, T NAKASE
NUCLEIC ACIDS RESEARCH 21 ( 17 ) 4039 - 4045 1993.08
The evolution change of the genetic code as restricted by the anticodon and identity of transfer RNA
Origin of Life and Evolution of the Biosphere 23,345 1993
原索類ミトコンドリアゲノムの遺伝子構造とAGRコドンの進化
横堀伸一, 渡辺洋一, 横川隆志, 上島励, 上田卓也, 西川一八, 渡辺公綱
日本分子生物学会年会プログラム・講演要旨集 16th 1993
軟体動物ミトコンドリアDNAの遺伝子配置とtRNAの異常構造
海部雅之, 中西茂子, 山崎仁香, 貴家潤治, 横堀伸一, 上島励, 上田卓也, 西川一八, 渡辺公綱
日本分子生物学会年会プログラム・講演要旨集 16th 1993
SERINE TRANSFER-RNA COMPLEMENTARY TO THE NONUNIVERSAL SERINE CODON CUG IN CANDIDA-CYLINDRACEA - EVOLUTIONARY IMPLICATIONS
T YOKOGAWA, T SUZUKI, T UEDA, M MORI, T OHAMA, Y KUCHINO, S YOSHINARI, MOTOKI, I, K NISHIKAWA, S OSAWA, K WATANABE
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 89 ( 16 ) 7408 - 7411 1992.08
LARGE-SCALE ISOLATION AND SOME PROPERTIES OF AGY-SPECIFIC SERINE TRANSFER-RNA FROM BOVINE HEART-MITOCHONDRIA
T UEDA, T OHTA, K WATANABE
JOURNAL OF BIOCHEMISTRY 98 ( 5 ) 1275 - 1284 1985
STRUCTURAL FEATURES OF BOVINE MITOCHONDRIAL TRANSFER RNAAGY(SER) LACKING THE D-ARM
T UEDA, K WATANABE, T OHTA
PROCEEDINGS OF THE JAPAN ACADEMY SERIES B-PHYSICAL AND BIOLOGICAL SCIENCES 59 ( 10 ) 339 - 342 1983
リポ多糖混入量を低減した蛋白質合成用組成物、該組成物を用いた蛋白質製造方法
特許第5948673号
金森 崇, 速水 友紀, 古城 周久, 上田 卓也, 對比地, 久美子, 布施 朋重, 中村 美紀子, 加藤 静恵
Patent
無細胞翻訳系でFabを提示しうるポリヌクレオチド構築物ならびにそれを用いたFabの製造方法およびスクリーニング方法
藤野 泰寛, 藤田 梨紗子, 和田 浩一, 小田 古都美, 上田 卓也, 清水 義宏, 金森 崇
Patent
無細胞翻訳系でFabを提示しうるポリヌクレオチド構築物ならびにそれを用いたFabの製造方法およびスクリーニング方法
特許第5920835号
藤野 泰寛, 藤田 梨紗子, 和田 浩一, 小田 古都美, 上田 卓也, 清水 義宏, 金森 崇
Patent
JB論文賞
2012 日本生化学会
JB論文賞
1995 日本生化学会
進化工学
蛋白質合成系の研究
Study on the Protein synthesis
2019
Master's Thesis (Department of Integrative Bioscience and Biomedical Engineering)
Graduate School of Advanced Science and Engineering
2022 full year
Master's Thesis (Department of Integrative Bioscience and Biomedical Engineering)
Graduate School of Advanced Science and Engineering
2022 full year
Seminar on Synthetic Biology D
Graduate School of Advanced Science and Engineering
2022 fall semester
Seminar on Synthetic Biology C
Graduate School of Advanced Science and Engineering
2022 spring semester
Seminar on Synthetic Biology B
Graduate School of Advanced Science and Engineering
2022 fall semester
Seminar on Synthetic Biology A
Graduate School of Advanced Science and Engineering
2022 spring semester
Graduate School of Advanced Science and Engineering
2022 an intensive course(fall)
Special Lectures on Molecular Genetics
Graduate School of Advanced Science and Engineering
2022 spring semester
Integrative Bioscience and Biomedical Engineering B
Graduate School of Advanced Science and Engineering
2022 fall semester
Integrative Bioscience and Biomedical Engineering A
Graduate School of Advanced Science and Engineering
2022 spring semester
Special Lectures on Molecular Genetics
Graduate School of Advanced Science and Engineering
2022 spring semester
Integrative Bioscience and Biomedical Engineering B
Graduate School of Advanced Science and Engineering
2022 fall semester
Integrative Bioscience and Biomedical Engineering A
Graduate School of Advanced Science and Engineering
2022 spring semester
Seminar on Synthetic Biology D
Graduate School of Advanced Science and Engineering
2022 fall semester
Seminar on Synthetic Biology C
Graduate School of Advanced Science and Engineering
2022 spring semester
Seminar on Synthetic Biology B
Graduate School of Advanced Science and Engineering
2022 fall semester
Seminar on Synthetic Biology A
Graduate School of Advanced Science and Engineering
2022 spring semester
Integrative Bioscience and Biomedical Engineering A
Graduate School of Advanced Science and Engineering
2022 spring semester
基礎講義Ⅱ
東京大学
分子生物学II
東京大学